BMRB Entry 16415

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16415

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
1H NMR and fluorescence studies of the complexation of DMPG by wheat non-specific lipid transfer protein. Global fold of the complex
Deposition date:
2009-07-23
Original release date:
2010-03-08
Authors:
Sodano, Patrick; Caille, Anita; Sy, Denise; de Person, Gregoire; Marion, Didier; Ptak, Marius
Citation:

Citation: Sodano, Patrick; Caille, Anita; Sy, Denise; de Person, Gregoire; Marion, Didier; Ptak, Marius. "1H NMR and fluorescence studies of the complexation of DMPG by wheat non-specific lipid transfer protein. Global fold of the complex"  FEBS Lett. 1, 130-134 (1997).
PubMed: 9369197

Assembly members:

Assembly members:
DMPG, non-polymer, 722.970 Da.
ns-LTP, polymer, . residues, Formula weight is not available

Natural source:

Natural source:   Common Name: bread wheat   Taxonomy ID: 4565   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Triticum aestivum

Experimental source:

Experimental source:   Production method: purified from the natural source   Host organism: Triticum aestivum   Vector: na

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ns-LTP: IDCGHVDSLVRPCLSYVQGG PGPSGQCCDGVKNLHNQARS QSDRQSACNCLKGIARGIHN LNEDNARSIPPKCGVNLPYT ISLNIDCSRV

Data sets:
  • binding constants
Data typeCount
binding constants12

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1ns-LTP2
2DMPG1

Entities:

Entity 2, ns-LTP - Formula weight is not available

1   ILEASPCYSGLYHISVALASPSERLEUVAL
2   ARGPROCYSLEUSERTYRVALGLNGLYGLY
3   PROGLYPROSERGLYGLNCYSCYSASPGLY
4   VALLYSASNLEUHISASNGLNALAARGSER
5   GLNSERASPARGGLNSERALACYSASNCYS
6   LEULYSGLYILEALAARGGLYILEHISASN
7   LEUASNGLUASPASNALAARGSERILEPRO
8   PROLYSCYSGLYVALASNLEUPROTYRTHR
9   ILESERLEUASNILEASPCYSSERARGVAL

Entity 1, DMPG - C38 H75 O10 P - 722.970 Da.

Samples:

sample_1: ns-LTP 3 mM; DMPG 0.6 mM; D2O 100%

sample_2: ns-LTP 3 mM; DMPG 1.2 mM; D2O 100%

sample_3: ns-LTP 3 mM; DMPG 1.8 mM; D2O 100%

sample_4: ns-LTP 3 mM; DMPG 2.4 mM; D2O 100%

sample_5: ns-LTP 3 mM; DMPG 3 mM; D2O 100%

sample_6: ns-LTP 3 mM; DMPG 3.6 mM; D2O 100%

sample_conditions_1: pH: 6; pressure: 1 atm; temperature: 308 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_2isotropicsample_conditions_1
2D 1H-1H TOCSYsample_3isotropicsample_conditions_1
2D 1H-1H TOCSYsample_4isotropicsample_conditions_1
2D 1H-1H TOCSYsample_5isotropicsample_conditions_1
2D 1H-1H TOCSYsample_6isotropicsample_conditions_1
1D 1Hsample_1isotropicsample_conditions_1
1D 1Hsample_2isotropicsample_conditions_1
1D 1Hsample_3isotropicsample_conditions_1
1D 1Hsample_4isotropicsample_conditions_1
1D 1Hsample_5isotropicsample_conditions_1
1D 1Hsample_6isotropicsample_conditions_1

Software:

DIANA, Guntert, Braun and Wuthrich - structure solution

SYBYL, Tripos - structure solution

NMR spectrometers:

  • Bruker na 500 MHz

Related Database Links:

BMRB 2065 4383
PDB
EMBL CAA45210 CAH69187
GB AAB22334 AAN75627
PIR S22528
PRF 1814270A
SP P24296
AlphaFold P24296