BMRB Entry 16323

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16323

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Title:
SLBP RBD 30-mer peptide
Deposition date:
2009-05-28
Original release date:
2012-08-03
Authors:
Thapar, Roopa
Citation:

Citation: Krishnan, Nithya; Lam, Tukiet; Fritz, Andrew; Rempinski, Donald; Minderman, Kieran; Berezney, Hans; Marzluff, Ronald; Thapar, William. "The prolyl isomerase Pin1 targets stem-loop binding protein (SLBP) to dissociate the SLBP-histone mRNA complex linking histone mRNA decay with SLBP ubiquitination."  Mol. Cell. Biol. 32, 4306-4322 (2012).
PubMed: 22907757

Assembly members:

Assembly members:
SLBP30mer, polymer, 30 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SLBP30mer: ETDESVLMRRQKQINYGKNT IAYDRYIKEV

Data sets:
Data typeCount
1H chemical shifts169

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1SLBP30mer1

Entities:

Entity 1, SLBP30mer 30 residues - Formula weight is not available

1   GLUTHRASPGLUSERVALLEUMETARGARG
2   GLNLYSGLNILEASNTYRGLYLYSASNTHR
3   ILEALATYRASPARGTYRILELYSGLUVAL

Samples:

sample_1: SLBP30mer1 – 7 mM; H2O 90%; D2O 10%; NaCl 50 mM

sample_conditions_1: ionic strength: 0.050 M; pH: 5; pressure: 1 atm; temperature: 278 K

Experiments:

NameSampleSample stateSample conditions
2D DQF-COSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1

Software:

FELIX, Accelrys Software Inc. - processing

NMR spectrometers:

  • Varian INOVA 700 MHz
  • Varian INOVA 600 MHz

Related Database Links:

PDB
DBJ BAE20786 BAE22851 BAE32343 BAE36737 BAG38003
EMBL CAA94918
GB AAB97091 AAC53530 AAH14908 AAH15703 AAH29631
REF NP_001039345 NP_001231786 NP_001233401 NP_001276653 NP_001276654
SP P97440 Q14493
TPG DAA28416
AlphaFold P97440 Q14493