BMRB Entry 15993

Name: 1H-15N Backbone Chemical shifts Of the C-terminal part of the Phosphoprotein (XD) of Measle Virus
Published: 2009-04-03

Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR15993

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H-15N Backbone Chemical shifts Of the C-terminal part of the Phosphoprotein (XD) of Measle Virus

Deposition date:

2008-10-20

Original release date:

2009-04-03

Authors:

Bernard, Cedric; Bourhis, Jean Marie; Gely, Stephane; Morelli, Xavier; Longhi, Sonia; Darbon, Herv

Citation:

Citation: Bernard, Cedric; Gely, Stephane; Bourhis, Jean-Marie; Morelli, Xavier; Longhi, Sonia; Darbon, Herv. "Interaction between the C-terminal Domains Of N and P Proteins of measles virus investigated by NMR" FEBS Lett. 583, 1084-1089 (2009).
PubMed: 19275899

Assembly members:

Assembly members:
XD, polymer, 44 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Measles Taxonomy ID: 11234 Superkingdom: Viruses Kingdom: not available Genus/species: Morbillivirus Measles virus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET21a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
XD: VIRSIIKSSRLEEDRKRYLM TLLDDIKGANDLAKFHQMLV KIIM

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
15N chemical shifts	43
1H chemical shifts	43

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	XD	1

Entities:

Entity 1, XD 44 residues - Formula weight is not available

1

VAL

ILE

ARG

SER

ILE

LYS

SER

ARG

2

LEU

GLU

ASP

ARG

LYS

ARG

TYR

LEU

MET

3

THR

LEU

ASP

ILE

LYS

GLY

ALA

ASN

4

ASP

LEU

ALA

LYS

PHE

HIS

GLN

MET

LEU

VAL

5

LYS

ILE

MET

Samples:

sample_1: XD, [U-100% 15N], 1.2 mM; H2O 90%; D2O 10%

sample_conditions_1: pH: 8; pressure: 1 atm; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC-NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1

Software:

xwinnmr, Bruker Biospin - collection

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMRView, Johnson, One Moon Scientific - chemical shift assignment

NMR spectrometers:

Bruker Avance 600 MHz
Bruker DRX 500 MHz

BMRB	15994 16000
PDB	1T6O 2K9D
DBJ	BAA09955 BAA09962 BAA33868 BAA33874 BAA34978
EMBL	CAA34578 CAA34585 CAA91364 CAQ15998 CAQ15999
GB	AAA46434 AAA46435 AAA46437 AAA63284 AAA63285
REF	NP_056919
SP	P03422 P35974 Q9WMB4
AlphaFold	P03422 P35974 Q9WMB4