BMRB Entry 15980

Title:
Lipopolysaccharide Bound Structures of the Active Fragments of Fowlicidin-1, a Cathelicidin Family of Antimicrobial and Antiendotoxic Peptide from Chicken, Determined by Transferred Nuclear Overhauser Effect Spectroscopy
Deposition date:
2008-10-07
Original release date:
2009-02-09
Authors:
Bhunia, Anirban; Bhattacharjya, Surajit
Citation:

Citation: Bhunia, Anirban; Bhattacharjya, Surajit. "Lipopolysaccharide Bound Structures of the Active Fragments of Fowlicidin-1, a Cathelicidin Family of Antimicrobial and Antiendotoxic Peptide from Chicken, Determined by Transferred Nuclear Overhauser Effect Spectroscopy"  Biopolymers 92, 9-22 (2009).
PubMed: 18844294

Assembly members:

Assembly members:
Fowlicidin-1, polymer, 12 residues, 1428.736 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: solid phase peptide synthesis   Vector: solid phase peptide synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Fowlicidin-1: AGYNLYRAIKKK

Data sets:
Data typeCount
1H chemical shifts64

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Fowlicidin-11

Entities:

Entity 1, Fowlicidin-1 12 residues - 1428.736 Da.

1   ALAGLYTYRASNLEUTYRARGALAILELYS
2   LYSLYS

Samples:

sample_1: H2O 90%; D2O 10%; entity

sample_conditions_1: pH: 4.5; temperature: 288 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1

Software:

DYANA v1.5, Guntert, Braun and Wuthrich - refinement

NMR spectrometers:

  • Bruker DRX 600 MHz