BMRB Entry 15780

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PDB ID: 2k3z
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15780
MolProbity Validation Chart

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Title:
NMR structure of adenosine bulged RNA duplex with C:G-A triple
Deposition date:
2008-05-26
Original release date:
2008-09-02
Authors:
Popenda, Lukasz; Bielecki, Lukasz; Gdaniec, Zofia; Adamiak, Ryszard
Citation:

Citation: Popenda, Lukasz; Adamiak, Ryszard; Gdaniec, Zofia. "Bulged adenosine influence on the RNA duplex conformation in solution."  Biochemistry 47, 5059-5067 (2008).
PubMed: 18399645

Assembly members:

Assembly members:
RNA_(5'-R(*GP*UP*CP*GP*AP*GP*CP*UP*G)-3')_, polymer, 9 residues, 2887.786 Da.
RNA_(5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')_, polymer, 8 residues, 2524.609 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
RNA_(5'-R(*GP*UP*CP*GP*AP*GP*CP*UP*G)-3')_: GUCGAGCUG
RNA_(5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')_: CAGCCGAC

Data sets:
Data typeCount
13C chemical shifts52
1H chemical shifts72
31P chemical shifts7

Additional metadata:

  • Assembly
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  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1RNA (5'-R(*GP*UP*CP*GP*AP*GP*CP*UP*G)-3')1
2RNA (5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')2

Entities:

Entity 1, RNA (5'-R(*GP*UP*CP*GP*AP*GP*CP*UP*G)-3') 9 residues - 2887.786 Da.

1   GUCGAGCUG

Entity 2, RNA (5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3') 8 residues - 2524.609 Da.

1   CAGCCGAC