BMRB Entry 15681

Name: CPAP PN2-3 module
Published: 2008-07-08

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15681

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

CPAP PN2-3 module

Deposition date:

2008-03-14

Original release date:

2008-07-08

Authors:

Savarin, Philippe

Citation:

Citation: Clement, Marie-Jeanne; Savarin, Philippe; Coutant, Jerome; Toma, Flavio; Curmi, Patrick. "NMR assignment of PN2-3, a tubulin interaction subdomain of the CPAP protein" Biomol. NMR Assignments 2, 115-117 (2008).
PubMed: 19636883

Assembly members:

Assembly members:
CPAP_PN2-3, polymer, 113 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pet16b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CPAP_PN2-3: AQKHDDSSEVANIEERPIKA AIGERKQTFEDYLEEQIQLE EQELKQKQLKEAEGPLPIKA KPKQPFLKRGEGLARFTNAK SKFQKGKESKLVTNQSTSED QPLFKMDRQQLQR

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	483
15N chemical shifts	109
1H chemical shifts	761

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	PN2-3	1

Entities:

Entity 1, PN2-3 113 residues - Formula weight is not available

module of PN2-3

1

ALA

GLN

LYS

HIS

ASP

SER

GLU

VAL

2

ALA

ASN

ILE

GLU

ARG

PRO

ILE

LYS

ALA

3

ALA

ILE

GLY

GLU

ARG

LYS

GLN

THR

PHE

GLU

4

ASP

TYR

LEU

GLU

GLN

ILE

GLN

LEU

GLU

5

GLU

GLN

GLU

LEU

LYS

GLN

LYS

GLN

LEU

LYS

6

GLU

ALA

GLU

GLY

PRO

LEU

PRO

ILE

LYS

ALA

7

LYS

PRO

LYS

GLN

PRO

PHE

LEU

LYS

ARG

GLY

8

GLU

GLY

LEU

ALA

ARG

PHE

THR

ASN

ALA

LYS

9

SER

LYS

PHE

GLN

LYS

GLY

LYS

GLU

SER

LYS

10

LEU

VAL

THR

ASN

GLN

SER

THR

SER

GLU

ASP

11

GLN

PRO

LEU

PHE

LYS

MET

ASP

ARG

GLN

12

LEU

GLN

ARG

Samples:

sample_1: CPAP PN2-3, [U-99% 13C; U-99% 15N], 1 ± 0.3 mM

sample_conditions_1: ionic strength: 0.15 M; pH: 6.8; pressure: 1 atm; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1

Software:

NMRView v5.0.4, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax, Johnson, One Moon Scientific - chemical shift assignment

NMR spectrometers:

Bruker DRX 600 MHz

DBJ	BAF85095
EMBL	CAI46195
GB	AAG21074 AAH92467 AAI13111 AAI13112 AAI13663
REF	NP_001029343 NP_060921 XP_003273172 XP_003273173 XP_003812656
SP	Q5BQN8 Q9HC77
AlphaFold	Q5BQN8 Q9HC77