BMRB Entry 15667

Title:
Solution structure of Fowlicidin-1 (LK19) in the presence of LPS
Deposition date:
2008-02-20
Original release date:
2008-10-31
Authors:
Bhunia, Anirban; Bhattacharjya, Surajit
Citation:

Citation: Bhunia, Anirban; Mohanram, Harini; Bhattacharjya, Surajit. "Lipopolysaccharide bound structures of the active fragments of fowlicidin-1, a cathelicidin family of antimicrobial and antiendotoxic peptide from chicken, determined by transferred nuclear overhauser effect spectroscopy"  Biopolymers 92, 9-22 (2009).
PubMed: 18844294

Assembly members:

Assembly members:
LK19, polymer, 19 residues, 2224.778 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: Solid phase peptide synthesis   Host organism: solid phase peptide synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
LK19: LVIRTVIAGYNLYRAIKKK

Data sets:
Data typeCount
1H chemical shifts124

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1LK191

Entities:

Entity 1, LK19 19 residues - 2224.778 Da.

1   LEUVALILEARGTHRVALILEALAGLYTYR
2   ASNLEUTYRARGALAILELYSLYSLYS

Samples:

sample_1: LK19 0.5 mM; H2O 90%; D2O 10%

sample_conditions_1: pH: 4.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H trNOESYsample_1isotropicsample_conditions_1

Software:

DYANA v1.5, Guntert, Mumenthaler and Wuthrich - refinement

NMR spectrometers:

  • Bruker DRX 600 MHz

Related Database Links:

BMRB 15979 20125 21013
PDB
DBJ BAF75952
GB AAS99323 AAZ42399 AAZ65841 ACR22842 ADZ99028
REF NP_001001605
SP Q6QLQ5
AlphaFold Q6QLQ5