Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15475
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Walker, Christina; Hinderhofer, Markus; Witte, David; Boos, Winfried; Moeller, Heiko. "Solution Structure of the Soluble Domain of the NfeD Protein YuaF from Bacillus subtilis" J. Biomol. NMR 42, 69-76 (2008).
PubMed: 18696230
Assembly members:
YuaF, polymer, 84 residues, 8843.8 Da.
Natural source: Common Name: Bacillus subtilis Taxonomy ID: 1423 Superkingdom: Bacteria Kingdom: not available Genus/species: Bacillus subtilis
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pHIHO1421
Entity Sequences (FASTA):
YuaF: GSHMLESSAEESLAYREDDL
RGRLGKVITAVPVDGFGEVV
IEGIGGTISKSAVSFDNQQI
SYGTTVLVVDINNGVLSVTP
HEPI
Data type | Count |
13C chemical shifts | 362 |
15N chemical shifts | 84 |
1H chemical shifts | 544 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | YuaF | 1 |
Entity 1, YuaF 84 residues - 8843.8 Da.
1 | GLY | SER | HIS | MET | LEU | GLU | SER | SER | ALA | GLU | ||||
2 | GLU | SER | LEU | ALA | TYR | ARG | GLU | ASP | ASP | LEU | ||||
3 | ARG | GLY | ARG | LEU | GLY | LYS | VAL | ILE | THR | ALA | ||||
4 | VAL | PRO | VAL | ASP | GLY | PHE | GLY | GLU | VAL | VAL | ||||
5 | ILE | GLU | GLY | ILE | GLY | GLY | THR | ILE | SER | LYS | ||||
6 | SER | ALA | VAL | SER | PHE | ASP | ASN | GLN | GLN | ILE | ||||
7 | SER | TYR | GLY | THR | THR | VAL | LEU | VAL | VAL | ASP | ||||
8 | ILE | ASN | ASN | GLY | VAL | LEU | SER | VAL | THR | PRO | ||||
9 | HIS | GLU | PRO | ILE |
sample_1: YuaF, [U-13C; U-15N], 0.9 mM; TRIS 50 mM; sodium chloride 300 mM; sodium azide 4 mM; H2O 95%; D2O 5%
sample_2: YuaF, [U-13C; U-15N], 0.9 mM; TRIS 50 mM; sodium chloride 300 mM; sodium azide 4 mM; D2O 100%
sample_3: YuaF, [U-15N], 1 mM; TRIS 50 mM; sodium chloride 300 mM; sodium azide 4 mM; H2O 95%; D2O 5%
sample_conditions_1: ionic strength: 300 mM; pH: 7.5; pressure: 1 atm; temperature: 280 K
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
2D 1H-13C HSQC | sample_2 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D HN(CA)CO | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N TOCSY | sample_3 | isotropic | sample_conditions_1 |
3D 1H-15N NOESY | sample_3 | isotropic | sample_conditions_1 |
3D HCCH-COSY | sample_2 | isotropic | sample_conditions_1 |
3D HCCH-TOCSY | sample_2 | isotropic | sample_conditions_1 |
3D (H)CCH-TOCSY | sample_2 | isotropic | sample_conditions_1 |
3D 1H-13C NOESY | sample_2 | isotropic | sample_conditions_1 |
(HB)CB(CGCD)HD | sample_2 | isotropic | sample_conditions_1 |
(HB)CB(CGCDCE)HE | sample_2 | isotropic | sample_conditions_1 |
2D 1H-13C HSQC aromatic | sample_2 | isotropic | sample_conditions_1 |
3D 1H-13C NOESY aromatic | sample_2 | isotropic | sample_conditions_1 |
xwinnmr v3.6, Bruker Biospin - collection
CARA v1.8.4, Keller and Wuthrich - chemical shift assignment
TOPSPIN v1.3.b.20, Bruker Biospin - processing
PDB | |
DBJ | BAI86617 BAM55168 BAM59181 GAK80134 |
EMBL | CAB15080 CCU60134 CEI58332 CEJ78754 CUB18741 |
GB | ADV93901 AEP92103 AFQ58945 AGA22830 AGE64696 |
REF | NP_390980 WP_003243808 WP_009968051 WP_014477773 WP_014480657 |
SP | O32077 |
AlphaFold | O32077 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks