BMRB Entry 15460

Title:
High resolution structure of AK12 in the presence of Lipopolysaccharide (LPS)
Deposition date:
2007-09-05
Original release date:
2008-10-31
Authors:
Bhunia, Anirban; Bhattacharjya, Surajit
Citation:

Citation: Bhunia, Anirban; Mohanram, Harini; Bhattacharjya, Surajit. "Lipopolysaccharide bound structures of the active fragments of fowlicidin-1, a cathelicidin family of antimicrobial and antiendotoxic peptide from chicken, determined by transferred nuclear overhauser effect spectroscopy"  Biopolymers 92, 9-22 (2009).
PubMed: 18844294

Assembly members:

Assembly members:
AK12, polymer, 12 residues, 1428.736 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: Standard F-moc solid phase peptide synthesised   Host organism: Standard F-moc solid phase peptide synthesised   Vector: Standard F-moc solid phase peptide synthesised

Entity Sequences (FASTA):

Entity Sequences (FASTA):
AK12: AGYNLYRAIKKK

Data sets:
Data typeCount
1H chemical shifts64

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1AK121

Entities:

Entity 1, AK12 12 residues - 1428.736 Da.

1   ALAGLYTYRASNLEUTYRARGALAILELYS
2   LYSLYS

Samples:

sample_1: AK12 0.5 mM

sample_conditions_1: pH: 4.5; temperature: 288 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H trNOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1

Software:

DYANA, Guntert, Braun and Wuthrich - refinement

NMR spectrometers:

  • Bruker DRX 600 MHz