BMRB Entry 15115

Title:
Solution structure of antimicrobial peptide Arenicin-2 in water
Deposition date:
2007-01-29
Original release date:
2007-10-17
Authors:
Nadezhdin, Kirill; Shenkarev, Zakhar
Citation:

Citation: Ovchinnikovaa, Tatiana; Shenkareva, Zakhar; Nadezhdina, Kirill; Balandina, Sergey; Zhmaka, Maxim; Kudelinaa, Irina; Finkinaa, Ekaterina; Kokryakovb, Vladimir; Arseniev, Alexander. "Recombinant expression, synthesis, purification, and solution structure of arenicin"  Biochem. Biophys. Res. Commun. 360, 156-162 (2007).
PubMed: 17585874

Assembly members:

Assembly members:
antimicrobial_peptide, polymer, 21 residues, 2780.392 Da.

Natural source:

Natural source:   Common Name: lugworm   Taxonomy ID: 6344   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Arenicola marina

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET

Entity Sequences (FASTA):

Entity Sequences (FASTA):
antimicrobial_peptide: RWCVYAYVRIRGVLVRYRRC W

Data sets:
Data typeCount
1H chemical shifts140

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1arenicin-21

Entities:

Entity 1, arenicin-2 21 residues - 2780.392 Da.

SS-bond Cys3-Cys20

1   ARGTRPCYSVALTYRALATYRVALARGILE
2   ARGGLYVALLEUVALARGTYRARGARGCYS
3   TRP

Related Database Links:

BMRB 17430
PDB 2JNI 2L8X
GB AAV65143
SP Q5SC59
AlphaFold Q5SC59