BMRB Entry 15106

Name: Solution Structure of the second Clip domain in PAP2 (CASP Target)
Published: 2008-06-25

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PDB ID: 2ike
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15106
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of the second Clip domain in PAP2 (CASP Target)

Deposition date:

2007-01-22

Original release date:

2008-06-25

Authors:

Huang, R.; Lv, Z.; Dai, H.; Velde, D.; Prakash, O.; Jiang, H.

Citation:

Citation: Huang, R.; Lu, Z.; Dai, H.; Velde, D.; Prakash, O.; Jiang, H.. "The solution structure of clip domains from Manduca sexta prophenoloxidase activating proteinase-2" Biochemistry 46, 11431-11439 (2007).
PubMed: 17880110

Assembly members:

Assembly members:
Prophenoloxidase_activating_proteinase-2, polymer, 54 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Tobacco hawkmoth Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pQE60

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Prophenoloxidase_activating_proteinase-2: LSCLTPDNKPGKCVNIKKCT HLAEIEEDPIGEDETTYLKN SVCAGPEDNSVCCG

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	198
15N chemical shifts	51
1H chemical shifts	291

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	clip domain	1

Entities:

Entity 1, clip domain 54 residues - Formula weight is not available

1

LEU

SER

CYS

LEU

THR

PRO

ASP

ASN

LYS

PRO

2

GLY

LYS

CYS

VAL

ASN

ILE

LYS

CYS

THR

3

HIS

LEU

ALA

GLU

ILE

GLU

ASP

PRO

ILE

4

GLY

GLU

ASP

GLU

THR

TYR

LEU

LYS

ASN

5

SER

VAL

CYS

ALA

GLY

PRO

GLU

ASP

ASN

SER

6

VAL

CYS

GLY

Samples:

sample: Prophenoloxidase activating proteinase-2, [U-100% 13C; U-100% 15N], 1.0 mM; phosphate buffer 100 mM

sample_conditions_1: pH: 8.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D_13C-separated_NOESY	sample	isotropic	sample_conditions_1
3D_15N-separated_NOESY	sample	isotropic	sample_conditions_1

Software:

xwinnmr, Bruker - collection

SPARKY, Goddard - data analysis

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	2IKE
GB	AAL76085 AAZ91696