BMRB Entry 1476

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR1476

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H NMR Structure Characterization of a Recombinant Kringle 2 Domain from Human Tissue-Type Plasminogen Activator

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Byeon, In-Ja; Kelley, Robert; Llinas, M.

Citation:

Citation: Byeon, In-Ja; Kelley, Robert; Llinas, M.. "1H NMR Structure Characterization of a Recombinant Kringle 2 Domain from Human Tissue-Type Plasminogen Activator" Biochemistry 28, 9350-9360 (1989).

Assembly members:

Assembly members:
tissue plasminogen activator, polymer, 90 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: not available

Entity Sequences (FASTA):

Entity Sequences (FASTA):
tissue plasminogen activator: SEGNSDCYFGNGSAYRGTHS LTESGASCLPWNSMILIGKV YTAQNPSAQALGLGKHNYCR NPDGDAKPWCHVLKNRRLTW EYCDVPSCST

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
1H chemical shifts	42

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	tissue plasminogen activator	1

Entities:

Entity 1, tissue plasminogen activator 90 residues - Formula weight is not available

1	SER	GLU	GLY	ASN	SER	ASP	CYS	TYR	PHE	GLY
2	ASN	GLY	SER	ALA	TYR	ARG	GLY	THR	HIS	SER
3	LEU	THR	GLU	SER	GLY	ALA	SER	CYS	LEU	PRO
4	TRP	ASN	SER	MET	ILE	LEU	ILE	GLY	LYS	VAL
5	TYR	THR	ALA	GLN	ASN	PRO	SER	ALA	GLN	ALA
6	LEU	GLY	LEU	GLY	LYS	HIS	ASN	TYR	CYS	ARG
7	ASN	PRO	ASP	GLY	ASP	ALA	LYS	PRO	TRP	CYS
8	HIS	VAL	LEU	LYS	ASN	ARG	ARG	LEU	THR	TRP
9	GLU	TYR	CYS	ASP	VAL	PRO	SER	CYS	SER	THR

Samples:

sample_one:

sample_condition_set_one: pH: 7.2 na; temperature: 310 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

BMRB	1477 2261 349 350 351
PDB	1PK2 1PML 1TPK
DBJ	BAG60088 BAG60253 BAG62604
EMBL	CAA23833
GB	AAB32090 AAK11956

1	SER	GLU	GLY	ASN	SER	ASP	CYS	TYR	PHE	GLY
2	ASN	GLY	SER	ALA	TYR	ARG	GLY	THR	HIS	SER
3	LEU	THR	GLU	SER	GLY	ALA	SER	CYS	LEU	PRO
4	TRP	ASN	SER	MET	ILE	LEU	ILE	GLY	LYS	VAL
5	TYR	THR	ALA	GLN	ASN	PRO	SER	ALA	GLN	ALA
6	LEU	GLY	LEU	GLY	LYS	HIS	ASN	TYR	CYS	ARG
7	ASN	PRO	ASP	GLY	ASP	ALA	LYS	PRO	TRP	CYS
8	HIS	VAL	LEU	LYS	ASN	ARG	ARG	LEU	THR	TRP
9	GLU	TYR	CYS	ASP	VAL	PRO	SER	CYS	SER	THR

1	SER	GLU	GLY	ASN	SER	ASP	CYS	TYR	PHE	GLY
2	ASN	GLY	SER	ALA	TYR	ARG	GLY	THR	HIS	SER
3	LEU	THR	GLU	SER	GLY	ALA	SER	CYS	LEU	PRO
4	TRP	ASN	SER	MET	ILE	LEU	ILE	GLY	LYS	VAL
5	TYR	THR	ALA	GLN	ASN	PRO	SER	ALA	GLN	ALA
6	LEU	GLY	LEU	GLY	LYS	HIS	ASN	TYR	CYS	ARG
7	ASN	PRO	ASP	GLY	ASP	ALA	LYS	PRO	TRP	CYS
8	HIS	VAL	LEU	LYS	ASN	ARG	ARG	LEU	THR	TRP
9	GLU	TYR	CYS	ASP	VAL	PRO	SER	CYS	SER	THR