BMRB Entry 11468

Name: Solution STRUCTURE OF THE BOMBYX MORI LYSOZYME
Published: 2013-01-03

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PDB ID: 2rsc
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11468
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution STRUCTURE OF THE BOMBYX MORI LYSOZYME

Deposition date:

2011-12-19

Original release date:

2013-01-03

Authors:

Sato, Manami; Tochio, Naoya; Aizawa, Tomoyasu

Citation:

Citation: Sato, Manami; Tochio, Naoya; Watanabe, Satoru; Kigawa, Takanori; Aizawa, Tomoyasu. "Solution Structure of the Bombyx Mori LYSOZYME" .

Assembly members:

Assembly members:
THE BOMBYX MORI LYSOZYME, polymer, 120 residues, 13834.732 Da.

Natural source:

Natural source: Common Name: domestic silkworm Taxonomy ID: 7091 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Bombyx mori

Experimental source:

Experimental source: Production method: cell free synthesis Host organism: E. coli - cell free Vector: P101129-01

Entity Sequences (FASTA):

Entity Sequences (FASTA):
THE BOMBYX MORI LYSOZYME: GKTFTRCGLVHELRKHGFEE NLMRNWVCLVEHESSRDTSK TNTNRNGSKDYGLFQINDRY WCSKGASPGKDCNVKCSDLL TDDITKAAKCAKKIYKRHRF DAWYGWKNHCQGSLPDISSC

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	536
15N chemical shifts	139
1H chemical shifts	812

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	THE BOMBYX MORI LYSOZYME	1

Entities:

Entity 1, THE BOMBYX MORI LYSOZYME 120 residues - 13834.732 Da.

1	GLY	LYS	THR	PHE	THR	ARG	CYS	GLY	LEU	VAL
2	HIS	GLU	LEU	ARG	LYS	HIS	GLY	PHE	GLU	GLU
3	ASN	LEU	MET	ARG	ASN	TRP	VAL	CYS	LEU	VAL
4	GLU	HIS	GLU	SER	SER	ARG	ASP	THR	SER	LYS
5	THR	ASN	THR	ASN	ARG	ASN	GLY	SER	LYS	ASP
6	TYR	GLY	LEU	PHE	GLN	ILE	ASN	ASP	ARG	TYR
7	TRP	CYS	SER	LYS	GLY	ALA	SER	PRO	GLY	LYS
8	ASP	CYS	ASN	VAL	LYS	CYS	SER	ASP	LEU	LEU
9	THR	ASP	ASP	ILE	THR	LYS	ALA	ALA	LYS	CYS
10	ALA	LYS	LYS	ILE	TYR	LYS	ARG	HIS	ARG	PHE
11	ASP	ALA	TRP	TYR	GLY	TRP	LYS	ASN	HIS	CYS
12	GLN	GLY	SER	LEU	PRO	ASP	ILE	SER	SER	CYS

Name	Sample	Sample state	Sample conditions
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1

PDB	1GD6 2RSC
GB	AAB40947
REF	NP_001037448
SP	P48816
AlphaFold	P48816

BMRB Entry 11468

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	LYS	THR	PHE	THR	ARG	CYS	GLY	LEU	VAL
2	HIS	GLU	LEU	ARG	LYS	HIS	GLY	PHE	GLU	GLU
3	ASN	LEU	MET	ARG	ASN	TRP	VAL	CYS	LEU	VAL
4	GLU	HIS	GLU	SER	SER	ARG	ASP	THR	SER	LYS
5	THR	ASN	THR	ASN	ARG	ASN	GLY	SER	LYS	ASP
6	TYR	GLY	LEU	PHE	GLN	ILE	ASN	ASP	ARG	TYR
7	TRP	CYS	SER	LYS	GLY	ALA	SER	PRO	GLY	LYS
8	ASP	CYS	ASN	VAL	LYS	CYS	SER	ASP	LEU	LEU
9	THR	ASP	ASP	ILE	THR	LYS	ALA	ALA	LYS	CYS
10	ALA	LYS	LYS	ILE	TYR	LYS	ARG	HIS	ARG	PHE
11	ASP	ALA	TRP	TYR	GLY	TRP	LYS	ASN	HIS	CYS
12	GLN	GLY	SER	LEU	PRO	ASP	ILE	SER	SER	CYS

1	GLY	LYS	THR	PHE	THR	ARG	CYS	GLY	LEU	VAL
2	HIS	GLU	LEU	ARG	LYS	HIS	GLY	PHE	GLU	GLU
3	ASN	LEU	MET	ARG	ASN	TRP	VAL	CYS	LEU	VAL
4	GLU	HIS	GLU	SER	SER	ARG	ASP	THR	SER	LYS
5	THR	ASN	THR	ASN	ARG	ASN	GLY	SER	LYS	ASP
6	TYR	GLY	LEU	PHE	GLN	ILE	ASN	ASP	ARG	TYR
7	TRP	CYS	SER	LYS	GLY	ALA	SER	PRO	GLY	LYS
8	ASP	CYS	ASN	VAL	LYS	CYS	SER	ASP	LEU	LEU
9	THR	ASP	ASP	ILE	THR	LYS	ALA	ALA	LYS	CYS
10	ALA	LYS	LYS	ILE	TYR	LYS	ARG	HIS	ARG	PHE
11	ASP	ALA	TRP	TYR	GLY	TRP	LYS	ASN	HIS	CYS
12	GLN	GLY	SER	LEU	PRO	ASP	ILE	SER	SER	CYS

1	GLY	LYS	THR	PHE	THR	ARG	CYS	GLY	LEU	VAL
2	HIS	GLU	LEU	ARG	LYS	HIS	GLY	PHE	GLU	GLU
3	ASN	LEU	MET	ARG	ASN	TRP	VAL	CYS	LEU	VAL
4	GLU	HIS	GLU	SER	SER	ARG	ASP	THR	SER	LYS
5	THR	ASN	THR	ASN	ARG	ASN	GLY	SER	LYS	ASP
6	TYR	GLY	LEU	PHE	GLN	ILE	ASN	ASP	ARG	TYR
7	TRP	CYS	SER	LYS	GLY	ALA	SER	PRO	GLY	LYS
8	ASP	CYS	ASN	VAL	LYS	CYS	SER	ASP	LEU	LEU
9	THR	ASP	ASP	ILE	THR	LYS	ALA	ALA	LYS	CYS
10	ALA	LYS	LYS	ILE	TYR	LYS	ARG	HIS	ARG	PHE
11	ASP	ALA	TRP	TYR	GLY	TRP	LYS	ASN	HIS	CYS
12	GLN	GLY	SER	LEU	PRO	ASP	ILE	SER	SER	CYS