BMRB Entry 11441

Name: NMR chemical shift of bryum coronatum chitinase
Published: 2011-06-09

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11441

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR chemical shift of bryum coronatum chitinase

Deposition date:

2011-05-02

Original release date:

2011-06-09

Authors:

Shinya, Shoko; Ohnuma, Takayuki; Taira, Toki; Nishimura, Shigenori; Fukamizo, Tamo

Citation:

Citation: Taira, Toki; Mahoe, Yoko; Kawamoto, Noriko; Onaga, Shoko; Iwasaki, Hironori; Ohnuma, Takayuki; Fukamizo, Tamo. "Cloning and characterization of a small family 19 chitinase from moss (Bryum coronatum)." Glycobiology 21, 644-654 (2011).
PubMed: 21367878

Assembly members:

Assembly members:
Bryum coronatum chitinase, polymer, 205 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Moss Taxonomy ID: 216087 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Bryum coronatum

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET-22b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Bryum coronatum chitinase: QSWTSFVTPAVFEGWFPNRN PFYTYDGLVSASNGYPEFGT TGSLDDQKRELAAFLGNINQ ESGGLQFIQEQNPQSDYCDT SSTQYPCAAGKQYYGRGPIQ LSWNYNYGEAGADLGLDLLN NPDLVAQDSTVAWRTALWFW MKRDCHGAITASPPSFSGTI RIINGGLECNQPAGSIGNMQ MENRVTYYTQFCQTLGVDPG TDLRC

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	578
15N chemical shifts	192
1H chemical shifts	192

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Bryum coronatum chitinase	1

Entities:

Entity 1, Bryum coronatum chitinase 205 residues - Formula weight is not available

1

GLN

SER

TRP

THR

SER

PHE

VAL

THR

PRO

ALA

2

VAL

PHE

GLU

GLY

TRP

PHE

PRO

ASN

ARG

ASN

3

PRO

PHE

TYR

THR

TYR

ASP

GLY

LEU

VAL

SER

4

ALA

SER

ASN

GLY

TYR

PRO

GLU

PHE

GLY

THR

5

THR

GLY

SER

LEU

ASP

GLN

LYS

ARG

GLU

6

LEU

ALA

PHE

LEU

GLY

ASN

ILE

ASN

GLN

7

GLU

SER

GLY

LEU

GLN

PHE

ILE

GLN

GLU

8

GLN

ASN

PRO

GLN

SER

ASP

TYR

CYS

ASP

THR

9

SER

THR

GLN

TYR

PRO

CYS

ALA

GLY

10

LYS

GLN

TYR

GLY

ARG

GLY

PRO

ILE

GLN

11

LEU

SER

TRP

ASN

TYR

ASN

TYR

GLY

GLU

ALA

12

GLY

ALA

ASP

LEU

GLY

LEU

ASP

LEU

ASN

13

ASN

PRO

ASP

LEU

VAL

ALA

GLN

ASP

SER

THR

14

VAL

ALA

TRP

ARG

THR

ALA

LEU

TRP

PHE

TRP

15

MET

LYS

ARG

ASP

CYS

HIS

GLY

ALA

ILE

THR

16

ALA

SER

PRO

SER

PHE

SER

GLY

THR

ILE

17

ARG

ILE

ASN

GLY

LEU

GLU

CYS

ASN

18

GLN

PRO

ALA

GLY

SER

ILE

GLY

ASN

MET

GLN

19

MET

GLU

ASN

ARG

VAL

THR

TYR

THR

GLN

20

PHE

CYS

GLN

THR

LEU

GLY

VAL

ASP

PRO

GLY

21

THR

ASP

LEU

ARG

CYS

Samples:

sample_1: BcChiA, [U-99% 13C; U-99% 15N], 0.4 mM; sodium acetate 50 mM; H2O 90%; D2O 10%

sample_conditions_1: pH: 5.0; pressure: 1 atm; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCACO	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HNCOCA	sample_1	isotropic	sample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

Bruker Avance 500 MHz

BMRB	11466
PDB	3WH1 4IJ4
DBJ	BAF99002