BMRB Entry 11258

Name: Solution Structure of Mouse Hypothetical Protein 2900073H19RIK
Published: 2011-08-17

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PDB ID: 1wgk
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11258
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of Mouse Hypothetical Protein 2900073H19RIK

Deposition date:

2010-08-09

Original release date:

2011-08-17

Authors:

Zhao, C.; Saito, K.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Zhao, C.; Saito, K.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.. "Solution Structure of Mouse Hypothetical Protein 2900073H19RIK" .

Assembly members:

Assembly members:
ThiS domain, polymer, 114 residues, Formula weight is not available

Natural source:

Natural source: Common Name: house mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: cell free synthesis Host organism: E. coli - cell free Vector: P031215-85

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ThiS domain: GSSGSSGMAAPLCVKVEFGG GAELLFDGVKKHQVALPGQE EPWDIRNLLVWIKKNLLKER PELFIQGDSVRPGILVLIND ADWELLGELDYQLQDQDSIL FISTLHGGSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	472
15N chemical shifts	110
1H chemical shifts	763

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	RIKEN cDNA 2900073H19 protein	1

Entities:

Entity 1, RIKEN cDNA 2900073H19 protein 114 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

MET

ALA

2

PRO

LEU

CYS

VAL

LYS

VAL

GLU

PHE

GLY

3

GLY

ALA

GLU

LEU

PHE

ASP

GLY

VAL

LYS

4

LYS

HIS

GLN

VAL

ALA

LEU

PRO

GLY

GLN

GLU

5

GLU

PRO

TRP

ASP

ILE

ARG

ASN

LEU

VAL

6

TRP

ILE

LYS

ASN

LEU

LYS

GLU

ARG

7

PRO

GLU

LEU

PHE

ILE

GLN

GLY

ASP

SER

VAL

8

ARG

PRO

GLY

ILE

LEU

VAL

LEU

ILE

ASN

ASP

9

ALA

ASP

TRP

GLU

LEU

GLY

GLU

LEU

ASP

10

TYR

GLN

LEU

GLN

ASP

GLN

ASP

SER

ILE

LEU

11

PHE

ILE

SER

THR

LEU

HIS

GLY

SER

GLY

12

PRO

SER

GLY

Samples:

sample_1: ThiS domain mM; PiNa 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 6.0; pressure: 1 atm; temperature: 298.0 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 15N-separated NOESY	sample_1	isotropic	condition_1
3D 13C-separated NOESY	sample_1	isotropic	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20020425, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.8996, Kobayashi, N. - data analysis

CYANA v1.0.7, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1WGK 1XO3
DBJ	BAB31673 BAC33621 BAC33956
GB	AAH26994 AAI69094 EDL08423
REF	NP_001131034 NP_080891 XP_001500842 XP_006154072 XP_006181951
SP	Q9D2P4
AlphaFold	Q9D2P4