BMRB Entry 11257

Name: Solution Structure of Mouse Ubiquitin-like 3 Protein
Published: 2011-08-17

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PDB ID: 1wgh
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11257
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of Mouse Ubiquitin-like 3 Protein

Deposition date:

2010-08-09

Original release date:

2011-08-17

Authors:

Zhao, C.; Saito, K.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Zhao, C.; Saito, K.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.. "Solution Structure of Mouse Ubiquitin-like 3 Protein" .

Assembly members:

Assembly members:
Ubiquitin-like Fold, polymer, 116 residues, Formula weight is not available

Natural source:

Natural source: Common Name: house mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: cell free synthesis Host organism: E. coli - cell free Vector: P030414-75

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Ubiquitin-like Fold: GSSGSSGMSSHVPADMINLR LILVSGKTKEFLFSPNDSAS DIAKHVYDNWPMDWEEEQVS SPNILRLIYQGRFLHGNVTL GALKLPFGKTTVMHLVARET LPEPNSQGQRSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	445
15N chemical shifts	102
1H chemical shifts	710

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Ubiquitin-like Fold	1

Entities:

Entity 1, Ubiquitin-like Fold 116 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

MET

SER

2

HIS

VAL

PRO

ALA

ASP

MET

ILE

ASN

LEU

ARG

3

LEU

ILE

LEU

VAL

SER

GLY

LYS

THR

LYS

GLU

4

PHE

LEU

PHE

SER

PRO

ASN

ASP

SER

ALA

SER

5

ASP

ILE

ALA

LYS

HIS

VAL

TYR

ASP

ASN

TRP

6

PRO

MET

ASP

TRP

GLU

GLN

VAL

SER

7

SER

PRO

ASN

ILE

LEU

ARG

LEU

ILE

TYR

GLN

8

GLY

ARG

PHE

LEU

HIS

GLY

ASN

VAL

THR

LEU

9

GLY

ALA

LEU

LYS

LEU

PRO

PHE

GLY

LYS

THR

10

THR

VAL

MET

HIS

LEU

VAL

ALA

ARG

GLU

THR

11

LEU

PRO

GLU

PRO

ASN

SER

GLN

GLY

GLN

ARG

12

SER

GLY

PRO

SER

GLY

Samples:

sample_1: Ubiquitin-like Fold mM; PiNa 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 6.0; pressure: 1 atm; temperature: 298.0 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 15N-separated NOESY	sample_1	isotropic	condition_1
3D 13C-separated NOESY	sample_1	isotropic	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20020425, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.8996, Kobayashi, N. - data analysis

CYANA v1.0.7, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1WGH
GB	EMP31155 KFO80335
REF	XP_009564834