BMRB Entry 11255

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11255
MolProbity Validation Chart

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Title:
Solution Structure of Anticodon Binding Domain from Nuclear Receptor Coactivator 5 (Human KIAA1637 Protein)
Deposition date:
2010-08-09
Original release date:
2011-08-17
Authors:
Zhao, C.; Kigawa, T.; Tochio, N.; Koshiba, S.; Inoue, M.; Yokoyama, S.
Citation:

Citation: Zhao, C.; Kigawa, T.; Tochio, N.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution Structure of Anticodon Binding Domain from Nuclear Receptor Coactivator 5 (Human KIAA1637 Protein)"  .

Assembly members:

Assembly members:
Anticodon Binding Domain, polymer, 130 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: cell free synthesis   Host organism: E. coli - cell free   Vector: P030506-92

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Anticodon Binding Domain: GSSGSSGPVDCSVIVVNKQT KDYAESVGRKVRDLGMVVDL IFLNTEVSLSQALEDVSRGG SPFAIVITQQHQIHRSCTVN IMFGTPQEHRNMPQADAMVL VARNYERYKNECREKEREEI ARQASGPSSG

Data sets:
Data typeCount
13C chemical shifts499
15N chemical shifts117
1H chemical shifts812

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Anticodon Binding Domain1

Entities:

Entity 1, Anticodon Binding Domain 130 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYPROVALASP
2   CYSSERVALILEVALVALASNLYSGLNTHR
3   LYSASPTYRALAGLUSERVALGLYARGLYS
4   VALARGASPLEUGLYMETVALVALASPLEU
5   ILEPHELEUASNTHRGLUVALSERLEUSER
6   GLNALALEUGLUASPVALSERARGGLYGLY
7   SERPROPHEALAILEVALILETHRGLNGLN
8   HISGLNILEHISARGSERCYSTHRVALASN
9   ILEMETPHEGLYTHRPROGLNGLUHISARG
10   ASNMETPROGLNALAASPALAMETVALLEU
11   VALALAARGASNTYRGLUARGTYRLYSASN
12   GLUCYSARGGLULYSGLUARGGLUGLUILE
13   ALAARGGLNALASERGLYPROSERSERGLY

Samples:

sample_1: Anticodon Binding Domain, [U-13C; U-15N], 1.02 mM; d-Tris-HCl 20 mM; NaCl 200 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 200 mM; pH: 7.5; pressure: 1 atm; temperature: 298.0 K

Experiments:

NameSampleSample stateSample conditions
3D 13C-separated NOESYsample_1isotropiccondition_1
3D 15N-separated NOESYsample_1isotropiccondition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20020425, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.860, Kobayashi, N. - data analysis

CYANA v1.0.7, Guntert, P. - refinement, structure solution

NMR spectrometers:

  • Bruker AVANCE 800 MHz

Related Database Links:

PDB
DBJ BAB13463 BAC33631
EMBL CAH90835
GB AAG36793 AAH17152 AAI12848 AAI40837 AAI51134
REF NP_001039952 NP_001100013 NP_001125477 NP_001181331 NP_066018
SP Q91W39 Q9HCD5
TPG DAA23290
AlphaFold Q91W39 Q9HCD5

Download HSQC peak lists in one of the following formats:
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SPARKY: Backbone or all simulated peaks