BMRB Entry 11248

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PDB ID: 2yub
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11248
MolProbity Validation Chart

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Title:
Solution structure of the PDZ domain from mouse LIM domain kinase
Deposition date:
2010-07-23
Original release date:
2011-08-03
Authors:
Hayashi, F.; Suetake, T.; Yokoyama, S.
Citation:

Citation: Hayashi, F.; Suetake, T.; Yokoyama, S.. "Solution structure of the PDZ domain from mouse LIM domain kinase"  .

Assembly members:

Assembly members:
PDZ domain, polymer, 118 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: house mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:

Experimental source:   Production method: cell free synthesis   Host organism: E. coli - cell free   Vector: P041220-03

Entity Sequences (FASTA):

Entity Sequences (FASTA):
PDZ domain: GSSGSSGVQDQLPYSVTLIS MPATTECRRGFSVTVESASS NYATTVQVKEVNRMHISPNN RNAIHPGDRILEINGTPVRT LRVEEVEDAIKQTSQTLQLL IEHDPVPQRLDQSGPSSG

Data sets:
Data typeCount
13C chemical shifts483
15N chemical shifts115
1H chemical shifts782

Additional metadata:

  • Assembly
  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1PDZ domain1

Entities:

Entity 1, PDZ domain 118 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYVALGLNASP
2   GLNLEUPROTYRSERVALTHRLEUILESER
3   METPROALATHRTHRGLUCYSARGARGGLY
4   PHESERVALTHRVALGLUSERALASERSER
5   ASNTYRALATHRTHRVALGLNVALLYSGLU
6   VALASNARGMETHISILESERPROASNASN
7   ARGASNALAILEHISPROGLYASPARGILE
8   LEUGLUILEASNGLYTHRPROVALARGTHR
9   LEUARGVALGLUGLUVALGLUASPALAILE
10   LYSGLNTHRSERGLNTHRLEUGLNLEULEU
11   ILEGLUHISASPPROVALPROGLNARGLEU
12   ASPGLNSERGLYPROSERSERGLY

Related Database Links:

PDB 2YUB
DBJ BAA06675 BAA24488 BAA24489 BAA24491 BAA29035
GB AAC39947 AAH07129 ABK42255 EDL40412 EDL40413
REF NP_001029202 NP_034848 NP_774958 XP_005366157 XP_006514610
SP O54785
AlphaFold O54785

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SPARKY: Backbone or all simulated peaks