BMRB Entry 11235

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PDB ID: 2e7c
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11235
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the 6th Ig-like domain from human Myosin-binding protein C, fast-type

Deposition date:

2010-07-23

Original release date:

2011-08-03

Authors:

Qin, X.; Nagashima, T.; Hayashi, F.; Yokoyama, S.

Citation:

Citation: Qin, X.; Nagashima, T.; Hayashi, F.; Yokoyama, S.. "Solution structure of the 6th Ig-like domain from human Myosin-binding protein C, fast-type" .

Assembly members:

Assembly members:
Ig-like domain, polymer, 118 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Host organism: E. coli - cell free Vector: P060828-20

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Ig-like domain: GSSGSSGTLAQPVTIREIAE PPKIRLPRHLRQTYIRKVGE QLNLVVPFQGKPRPQVVWTK GGAPLDTSRVHVRTSDFDTV FFVRQAARSDSGEYELSVQI ENMKDTATIRIRVVEKAG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	515
15N chemical shifts	114
1H chemical shifts	828

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Ig-like domain	1

Entities:

Entity 1, Ig-like domain 118 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

THR

LEU

ALA

2

GLN

PRO

VAL

THR

ILE

ARG

GLU

ILE

ALA

GLU

3

PRO

LYS

ILE

ARG

LEU

PRO

ARG

HIS

LEU

4

ARG

GLN

THR

TYR

ILE

ARG

LYS

VAL

GLY

GLU

5

GLN

LEU

ASN

LEU

VAL

PRO

PHE

GLN

GLY

6

LYS

PRO

ARG

PRO

GLN

VAL

TRP

THR

LYS

7

GLY

ALA

PRO

LEU

ASP

THR

SER

ARG

VAL

8

HIS

VAL

ARG

THR

SER

ASP

PHE

ASP

THR

VAL

9

PHE

VAL

ARG

GLN

ALA

ARG

SER

ASP

10

SER

GLY

GLU

TYR

GLU

LEU

SER

VAL

GLN

ILE

11

GLU

ASN

MET

LYS

ASP

THR

ALA

THR

ILE

ARG

12

ILE

ARG

VAL

GLU

LYS

ALA

GLY

Samples:

sample_1: Ig-like domain, [U-13C; U-15N], 1.04 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 15N-separated NOESY	sample_1	isotropic	condition_1
3D 13C-separated NOESY	sample_1	isotropic	condition_1

Software:

VNMR v6.1C, Varian - collection

NMRPipe v20031121, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.9816, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Varian INOVA 800 MHz