BMRB Entry 1117

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR1117

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Studies of Individual Carbon Sites of Proteins in Solution by Natural Abundance Carbon 13 Nuclear Magnetic Resonance Spectroscopy

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Oldfield, Eric; Norton, Raymond; Allerhand, Adam

Citation:

Citation: Oldfield, Eric; Norton, Raymond; Allerhand, Adam. "Studies of Individual Carbon Sites of Proteins in Solution by Natural Abundance Carbon 13 Nuclear Magnetic Resonance Spectroscopy" J. Biol. Chem. 250, 6381-6402 (1975).

Assembly members:

Assembly members:
cytochrome c, polymer, 109 residues, Formula weight is not available
HEME C, non-polymer, 618.503 Da.

Natural source:

Natural source: Common Name: yeast Taxonomy ID: 4909 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Candida krusei

Experimental source:

Experimental source: Production method: not available

Entity Sequences (FASTA):

Entity Sequences (FASTA):
cytochrome c: PAPFEQGSAKKGATLFKTRC AQCHTIEAGGPHKVGPNLHG IFSRHSGQAEGYSYTDANKR AGVEWAEPTMSDYLENPXKY IPGTKMAFGGLKKAKDRNDL VTYMLEASK

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
13C chemical shifts	1

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	cytochrome c	1
2	Heme C	2

Entities:

Entity 1, cytochrome c 109 residues - Formula weight is not available

1

PRO

ALA

PRO

PHE

GLU

GLN

GLY

SER

ALA

LYS

2

LYS

GLY

ALA

THR

LEU

PHE

LYS

THR

ARG

CYS

3

ALA

GLN

CYS

HIS

THR

ILE

GLU

ALA

GLY

4

PRO

HIS

LYS

VAL

GLY

PRO

ASN

LEU

HIS

GLY

5

ILE

PHE

SER

ARG

HIS

SER

GLY

GLN

ALA

GLU

6

GLY

TYR

SER

TYR

THR

ASP

ALA

ASN

LYS

ARG

7

ALA

GLY

VAL

GLU

TRP

ALA

GLU

PRO

THR

MET

8

SER

ASP

TYR

LEU

GLU

ASN

PRO

M3L

LYS

TYR

9

ILE

PRO

GLY

THR

LYS

MET

ALA

PHE

GLY

10

LEU

LYS

ALA

LYS

ASP

ARG

ASN

ASP

LEU

11

VAL

THR

TYR

MET

LEU

GLU

ALA

SER

LYS

Entity 2, Heme C - C34 H34 Fe N4 O4 - 618.503 Da.

1

HEC

Samples:

sample_one: .

sample_condition_set_one: pH: 6.9 na; temperature: 309 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

BMRB	1115 219 223 226 229 235
GB	KGK39453
SP	P00041
AlphaFold	P00041