BMRB Entry 10331

Name: Solution structure of the 22th Filamin domain from human Filamin C
Published: 2010-04-14

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PDB ID: 2d7p
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10331
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the 22th Filamin domain from human Filamin C

Deposition date:

2009-04-14

Original release date:

2010-04-14

Authors:

Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.

Citation:

Citation: Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution structure of the 22th Filamin domain from human Filamin C" .

Assembly members:

Assembly members:
Filamin domain, polymer, 112 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P050404-13

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Filamin domain: GSSGSSGSDDARRLTVTSLQ ETGLKVNQPASFAVQLNGAR GVIDARVHTPSGAVEECYVS ELDSDKHTIRFIPHENGVHS IDVKFNGAHIPGSPFKIRVG EQSQAGSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	446
15N chemical shifts	108
1H chemical shifts	700

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Filamin domain	1

Entities:

Entity 1, Filamin domain 112 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

SER

ASP

2

ALA

ARG

LEU

THR

VAL

THR

SER

LEU

GLN

3

GLU

THR

GLY

LEU

LYS

VAL

ASN

GLN

PRO

ALA

4

SER

PHE

ALA

VAL

GLN

LEU

ASN

GLY

ALA

ARG

5

GLY

VAL

ILE

ASP

ALA

ARG

VAL

HIS

THR

PRO

6

SER

GLY

ALA

VAL

GLU

CYS

TYR

VAL

SER

7

GLU

LEU

ASP

SER

ASP

LYS

HIS

THR

ILE

ARG

8

PHE

ILE

PRO

HIS

GLU

ASN

GLY

VAL

HIS

SER

9

ILE

ASP

VAL

LYS

PHE

ASN

GLY

ALA

HIS

ILE

10

PRO

GLY

SER

PRO

PHE

LYS

ILE

ARG

VAL

GLY

11

GLU

GLN

SER

GLN

ALA

GLY

SER

GLY

PRO

SER

12

SER

GLY

Samples:

sample_1: Filamin domain, [U-13C; U-15N], 1.24 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 296 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	isotropic	condition_1
3D 15N-separated NOESY	sample_1	isotropic	condition_1

Software:

xwinnmr v3.5, Bruker - collection

NMRPipe v20030801, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.932, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	2D7P
EMBL	CDL67988