BMRB Entry 10141

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PDB ID: 2e9g
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR10141
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the alpha adaptinC2 domain from human Adapter-related protein complex 1 gamma 2 subunit

Deposition date:

2007-12-04

Original release date:

2008-12-10

Authors:

Tomizawa, T.; Koshiba, S.; Watanabe, S.; Harada, T.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Tomizawa, T.; Koshiba, S.; Watanabe, S.; Harada, T.; Kigawa, T.; Yokoyama, S.. "Solution structure of the alpha adaptinC2 domain from human Adapter-related protein complex 1 gamma 2 subunit" .

Assembly members:

Assembly members:
alpha adaptinC2 domain, polymer, 131 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P060123-24

Entity Sequences (FASTA):

Entity Sequences (FASTA):
alpha adaptinC2 domain: GSSGSSGPPPAPIPDLKVFE REGVQLNLSFIRPPENPALL LITITATNFSEGDVTHFICQ AAVPKSLQLQLQAPSGNTVP ARGGLPITQLFRILNPNKAP LRLKLRLTYDHFHQSVQEIF EVNNLPVESWQ

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	583
15N chemical shifts	127
1H chemical shifts	929

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	AP-1 complex subunit gamma-2	1

Entities:

Entity 1, AP-1 complex subunit gamma-2 131 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

PRO

2

ALA

PRO

ILE

PRO

ASP

LEU

LYS

VAL

PHE

GLU

3

ARG

GLU

GLY

VAL

GLN

LEU

ASN

LEU

SER

PHE

4

ILE

ARG

PRO

GLU

ASN

PRO

ALA

LEU

5

LEU

ILE

THR

ILE

THR

ALA

THR

ASN

PHE

SER

6

GLU

GLY

ASP

VAL

THR

HIS

PHE

ILE

CYS

GLN

7

ALA

VAL

PRO

LYS

SER

LEU

GLN

LEU

GLN

8

LEU

GLN

ALA

PRO

SER

GLY

ASN

THR

VAL

PRO

9

ALA

ARG

GLY

LEU

PRO

ILE

THR

GLN

LEU

10

PHE

ARG

ILE

LEU

ASN

PRO

ASN

LYS

ALA

PRO

11

LEU

ARG

LEU

LYS

LEU

ARG

LEU

THR

TYR

ASP

12

HIS

PHE

HIS

GLN

SER

VAL

GLN

GLU

ILE

PHE

13

GLU

VAL

ASN

LEU

PRO

VAL

GLU

SER

TRP

14

GLN

Samples:

sample_1: alpha adaptinC2 domain, [U-13C; U-15N], 0.54 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; D2O 10%; H2O 90%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 296 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

TOPSPIN v1.3, Bruker - collection

NMRPipe v20060524, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.9747, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE II 900 MHz

PDB	2E9G 2YMT 3ZHF 4BCX
DBJ	BAA33390 BAG65453
EMBL	CAD61898
GB	AAH51833 AIC59448 EAW66132 EAW66134 EAW66138
REF	NP_001269403 NP_001269404 NP_003908 XP_001163757 XP_002833830
SP	O75843
AlphaFold	O75843