BMRB Entry 10099

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PDB ID: 1uem
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10099
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of the First Fibronectin Type III domain of human KIAA1568 Protein

Deposition date:

2007-02-13

Original release date:

2008-08-15

Authors:

Li, H.; Kigawa, T.; Tochio, N.; Koshiba, S.; Inoue, M.; Yokoyama, S.

Citation:

Citation: Li, H.; Kigawa, T.; Tochio, N.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution Structure of the First Fibronectin Type III domain of human KIAA1568 Protein" .

Assembly members:

Assembly members:
Fibronectin Type III domain, polymer, 117 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P021007-51

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Fibronectin Type III domain: GSSGSSGKNYDLSDLPGPPS KPQVTDVTKNSVTLSWQPGT PGTLPASAYIIEAFSQSVSN SWQTVANHVKTTLYTVRGLR PNTIYLFMVRAINPQGLSDP SPMSDPVRTQDSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	464
15N chemical shifts	120
1H chemical shifts	775

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	KIAA1568 Protein	1

Entities:

Entity 1, KIAA1568 Protein 117 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

LYS

ASN

TYR

2

ASP

LEU

SER

ASP

LEU

PRO

GLY

PRO

SER

3

LYS

PRO

GLN

VAL

THR

ASP

VAL

THR

LYS

ASN

4

SER

VAL

THR

LEU

SER

TRP

GLN

PRO

GLY

THR

5

PRO

GLY

THR

LEU

PRO

ALA

SER

ALA

TYR

ILE

6

ILE

GLU

ALA

PHE

SER

GLN

SER

VAL

SER

ASN

7

SER

TRP

GLN

THR

VAL

ALA

ASN

HIS

VAL

LYS

8

THR

LEU

TYR

THR

VAL

ARG

GLY

LEU

ARG

9

PRO

ASN

THR

ILE

TYR

LEU

PHE

MET

VAL

ARG

10

ALA

ILE

ASN

PRO

GLN

GLY

LEU

SER

ASP

PRO

11

SER

PRO

MET

SER

ASP

PRO

VAL

ARG

THR

GLN

12

ASP

SER

GLY

PRO

SER

GLY

Samples:

sample_1: fibronectin type III domain, [U-13C; U-15N], 1.1 mM; phosphate 20 mM; NaCl 100 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 6.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20020425, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.811, Kobayashi, N. - data analysis

CYANA v1.0.7, Guntert, P. - structure solution

OPALp, Billeter, M., Guntert, P., Koradi, R. - refinement

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1UEM
REF	XP_002802664 XP_008574551 XP_009196316 XP_011746215 XP_011746218