BMRB Entry 10079

Name: Solution structure of putative domain of human KIAA0561 protein
Published: 2008-08-14

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PDB ID: 1v9v
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10079
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of putative domain of human KIAA0561 protein

Deposition date:

2007-01-23

Original release date:

2008-08-14

Authors:

Tochio, N.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Tochio, N.; Koshiba, S.; Inoue, M.; Kigawa, T.; Yokoyama, S.. "Solution structure of putative domain of human KIAA0561 protein" .

Assembly members:

Assembly members:
putative domain (residues 180-280), polymer, 114 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P030723-16

Entity Sequences (FASTA):

Entity Sequences (FASTA):
putative domain (residues 180-280): GSSGSSGPKATAQMEGRLQE FLTAYAPGARLALADGVLGF IHHQIVELARDCLAKSGENL VTSRYFLEMQEKLERLLQDA HERSDSEEVSFIVQLVRKLL IIISRPARSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	453
15N chemical shifts	98
1H chemical shifts	716

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	KIAA0561 protein	1

Entities:

Entity 1, KIAA0561 protein 114 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

PRO

LYS

ALA

2

THR

ALA

GLN

MET

GLU

GLY

ARG

LEU

GLN

GLU

3

PHE

LEU

THR

ALA

TYR

ALA

PRO

GLY

ALA

ARG

4

LEU

ALA

LEU

ALA

ASP

GLY

VAL

LEU

GLY

PHE

5

ILE

HIS

GLN

ILE

VAL

GLU

LEU

ALA

ARG

6

ASP

CYS

LEU

ALA

LYS

SER

GLY

GLU

ASN

LEU

7

VAL

THR

SER

ARG

TYR

PHE

LEU

GLU

MET

GLN

8

GLU

LYS

LEU

GLU

ARG

LEU

GLN

ASP

ALA

9

HIS

GLU

ARG

SER

ASP

SER

GLU

VAL

SER

10

PHE

ILE

VAL

GLN

LEU

VAL

ARG

LYS

LEU

11

ILE

SER

ARG

PRO

ALA

ARG

SER

GLY

12

PRO

SER

GLY

Samples:

sample_1: putative domain, [U-13C; U-15N], 1.3 mM; d-Tris HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20031121, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.853, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1V9V
DBJ	BAA25487 BAI45348
GB	AAC62830 EAW84657 EHH29807 EHH59364
REF	NP_055831 XP_001115216 XP_003915213 XP_004060339 XP_005259879
SP	O60307
AlphaFold	O60307