BMRB Entry 10033

Name: Soluiotn structure of J-domain of mouse DnaJ like protein
Published: 2008-08-13

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PDB ID: 1wjz
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10033
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Soluiotn structure of J-domain of mouse DnaJ like protein

Deposition date:

2006-11-01

Original release date:

2008-08-13

Authors:

Kobayashi, N.; Koshiba, S.; Inoue, M.; Tochio, N.; Tomizawa, T.; Kigawa, T.; Yokoyama, S.

Citation:

Citation: Kobayashi, N.; Koshiba, S.; Inoue, M.; Tochio, N.; Tomizawa, T.; Kigawa, T.; Yokoyama, S.. "Solution Structure of J-domain of mouse DnaJ like protein" .

Assembly members:

Assembly members:
J-domain, polymer, 94 residues, Formula weight is not available

Natural source:

Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P030324-95

Entity Sequences (FASTA):

Entity Sequences (FASTA):
J-domain: GSSGSSGMALEQTLKKDWYS ILGADPSANMSDLKQKYQKL ILLYHPDKQSADVPAGTMEE CMQKFIEIDQAWKILGNEET KKKYDLQRSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	401
15N chemical shifts	92
1H chemical shifts	638

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	1700030A21Rik protein	1

Entities:

Entity 1, 1700030A21Rik protein 94 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

MET

ALA

LEU

2

GLU

GLN

THR

LEU

LYS

ASP

TRP

TYR

SER

3

ILE

LEU

GLY

ALA

ASP

PRO

SER

ALA

ASN

MET

4

SER

ASP

LEU

LYS

GLN

LYS

TYR

GLN

LYS

LEU

5

ILE

LEU

TYR

HIS

PRO

ASP

LYS

GLN

SER

6

ALA

ASP

VAL

PRO

ALA

GLY

THR

MET

GLU

7

CYS

MET

GLN

LYS

PHE

ILE

GLU

ILE

ASP

GLN

8

ALA

TRP

LYS

ILE

LEU

GLY

ASN

GLU

THR

9

LYS

TYR

ASP

LEU

GLN

ARG

SER

GLY

10

PRO

SER

GLY

Samples:

sample_1: J-domain of DnaJ like protein, [U-13C; U-15N], 1.07 mM; Phosphate 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20020425, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.901, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1WJZ
DBJ	BAB24631
GB	AAH30072 AAH91774 AAK21968 EDL27758
REF	NP_081268
SP	Q91ZF0
AlphaFold	Q91ZF0