BMRB Entry 10032

Name: Solution structure of the first mbt domain from human KIAA1798 protein
Published: 2008-08-13

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PDB ID: 1wjs
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10032
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the first mbt domain from human KIAA1798 protein

Deposition date:

2006-11-01

Original release date:

2008-08-13

Authors:

Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.

Citation:

Citation: Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution structure of the first mbt domain from human KIAA1798 protein" .

Assembly members:

Assembly members:
mbt domain, polymer, 127 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P040119-27

Entity Sequences (FASTA):

Entity Sequences (FASTA):
mbt domain: GSSGSSGPYNKNGFKVGMKL EGVDPEHQSVYCVLTVAEVC GYRIKLHFDGYSDCYDFWVN ADALDIHPVGWCEKTGHKLH PPKGYKEEEFNWQTYLKTCK AQAAPKSLFENQNITVIPSG FSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	541
15N chemical shifts	119
1H chemical shifts	814

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	KIAA1798 protein	1

Entities:

Entity 1, KIAA1798 protein 127 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

PRO

TYR

ASN

2

LYS

ASN

GLY

PHE

LYS

VAL

GLY

MET

LYS

LEU

3

GLU

GLY

VAL

ASP

PRO

GLU

HIS

GLN

SER

VAL

4

TYR

CYS

VAL

LEU

THR

VAL

ALA

GLU

VAL

CYS

5

GLY

TYR

ARG

ILE

LYS

LEU

HIS

PHE

ASP

GLY

6

TYR

SER

ASP

CYS

TYR

ASP

PHE

TRP

VAL

ASN

7

ALA

ASP

ALA

LEU

ASP

ILE

HIS

PRO

VAL

GLY

8

TRP

CYS

GLU

LYS

THR

GLY

HIS

LYS

LEU

HIS

9

PRO

LYS

GLY

TYR

LYS

GLU

PHE

10

ASN

TRP

GLN

THR

TYR

LEU

LYS

THR

CYS

LYS

11

ALA

GLN

ALA

PRO

LYS

SER

LEU

PHE

GLU

12

ASN

GLN

ASN

ILE

THR

VAL

ILE

PRO

SER

GLY

13

PHE

SER

GLY

PRO

SER

GLY

Samples:

sample_1: mbt domain, [U-13C; U-15N], 1.03 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 296 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20030801, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B. A. - data analysis

Kujira v0.901, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz