BMRB Entry 10031

Name: Solution structure of the 2nd mbt domain from human KIAA1617 protein
Published: 2008-08-13

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PDB ID: 1wjr
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10031
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the 2nd mbt domain from human KIAA1617 protein

Deposition date:

2006-11-01

Original release date:

2008-08-13

Authors:

Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.

Citation:

Citation: Tomizawa, T.; Kigawa, T.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution structure of the 2nd mbt domain from human KIAA1617 protein" .

Assembly members:

Assembly members:
mbt domain, polymer, 127 residues, Formula weight is not available

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: cell free synthesis Vector: P040119-21

Entity Sequences (FASTA):

Entity Sequences (FASTA):
mbt domain: GSSGSSGPIDLITVGSLIEL QDSQNPFQYWIVSVIENVGG RLRLRYVGLEDTESYDQWLF YLDYRLRPVGWCQENKYRMD PPSEIYPLKMASEWKCTLEK SLIDAAKFPLPMEVFKDHAD LSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	558
15N chemical shifts	125
1H chemical shifts	878

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	KIAA1617 protein	1

Entities:

Entity 1, KIAA1617 protein 127 residues - Formula weight is not available

1

GLY

SER

GLY

SER

GLY

PRO

ILE

ASP

2

LEU

ILE

THR

VAL

GLY

SER

LEU

ILE

GLU

LEU

3

GLN

ASP

SER

GLN

ASN

PRO

PHE

GLN

TYR

TRP

4

ILE

VAL

SER

VAL

ILE

GLU

ASN

VAL

GLY

5

ARG

LEU

ARG

LEU

ARG

TYR

VAL

GLY

LEU

GLU

6

ASP

THR

GLU

SER

TYR

ASP

GLN

TRP

LEU

PHE

7

TYR

LEU

ASP

TYR

ARG

LEU

ARG

PRO

VAL

GLY

8

TRP

CYS

GLN

GLU

ASN

LYS

TYR

ARG

MET

ASP

9

PRO

SER

GLU

ILE

TYR

PRO

LEU

LYS

MET

10

ALA

SER

GLU

TRP

LYS

CYS

THR

LEU

GLU

LYS

11

SER

LEU

ILE

ASP

ALA

LYS

PHE

PRO

LEU

12

PRO

MET

GLU

VAL

PHE

LYS

ASP

HIS

ALA

ASP

13

LEU

SER

GLY

PRO

SER

GLY

Samples:

sample_1: mbt domain, [U-13C; U-15N], 1.14 mM; d-Tris-HCl 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	not available	condition_1
3D 15N-separated NOESY	sample_1	not available	condition_1

Software:

xwinnmr v2.6, Bruker - collection

NMRPipe v20030801, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B. A. - data analysis

Kujira v0.901, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement, structure solution

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1WJR
REF	XP_006717553 XP_008573689 XP_011760994 XP_011760995 XP_011760996