BMRB Entry 6648

Title:
Solution Structure of a Zap1 Zinc-Responsive Domain Provides Insights into Metalloregulatory Transcriptional Repression in Saccharomyces cerevisiae
Deposition date:
2005-05-25
Original release date:
2006-04-27
Authors:
Wang, Zhonghua; Feng, Linda; Venkataraman, Krishna; Matskevich, Viktor; Parasuram, Priya; Laity, John
Citation:

Citation: Wang, Zhonghua; Feng, Linda; Matskevich, Viktor; Venkataraman, Krishna; Parasuram, Priya; Laity, John. "Solution Structure of a Zap1 Zinc-responsive Domain Provides Insights into Metalloregulatory Transcriptional Repression in Saccharomyces cerevisiae"  J. Mol. Biol. 357, 1167-1183 (2006).

Assembly members:

Assembly members:
Zap1-2, polymer, 64 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.

Natural source:

Natural source:   Common Name: yeast   Taxonomy ID: 4932   Superkingdom: Eukaryota   Kingdom: Fungi   Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source:   Production method: recombinant technology   Vector: p21a-zzf1-2

Entity Sequences (FASTA):

Data sets:
Data typeCount
13C chemical shifts268
15N chemical shifts64
1H chemical shifts425

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
164 amino acid polypeptide1
2ZINC (II) ION, 12
3ZINC (II) ION, 22

Entities:

Entity 1, 64 amino acid polypeptide 64 residues - Formula weight is not available

1   ASPLEULYSCYSLYSTRPLYSGLUCYSPRO
2   GLUSERALASERSERLEUPHEASPLEUGLN
3   ARGHISLEULEULYSASPHISVALSERGLN
4   ASPPHELYSHISPROMETGLUPROLEUALA
5   CYSASNTRPGLUASPCYSASPPHELEUGLY
6   ASPASPTHRALASERILEVALASNHISILE
7   ASNALAGLNHIS

Entity 2, ZINC (II) ION, 1 - Zn - 65.409 Da.

1   ZN

Samples:

sample_1: Zap1-2, [U-13C; U-15N], 0.7 mM; ZN 1.5 mM; MES 20 mM; BME 5 mM; DSS 0.2 mM; NaN2 1 mM

conditions_1: pH: 6.9; temperature: 293 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N_HSQCsample_1not availableconditions_1
3D HNCACBsample_1not availableconditions_1
3D CBCA(CO)NHsample_1not availableconditions_1
3D HNCOsample_1not availableconditions_1
3D H(CA)CO(CA)NHsample_1not availableconditions_1
3D HNCAsample_1not availableconditions_1
3D HCCH-TOCSYsample_1not availableconditions_1
3D HCCH-COSYsample_1not availableconditions_1
3D C13NOESY-HSQC-sw_center 45ppmsample_1not availableconditions_1
3D N15NOESY-HSQCsample_1not availableconditions_1
3D C13NOESY-HSQC-sw_center 125ppmsample_1not availableconditions_1

Software:

NMRView v5.0.4 - Data analysis

NMRPipe v97.027.12.56 - Raw spectral data processing

NMR spectrometers:

  • Varian Inova 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks