BMRB Entry 5795

Title:
The Solution Structure of a Novel Type of Antifungal Peptide Distinct With a Five-disulfide Motif from Eucommia ulmoides Oliv
Deposition date:
2003-05-13
Original release date:
2004-09-14
Authors:
Huang, Ren-Huai; Wang, Da-Cheng
Citation:

Citation: Huang, Ren-Huai; Xiang, Y.; Tu, G.; Zhang, Y.; Wang, D.. "Solution structure of Eucommia antifungal peptide: a novel structural model distinct with a five-disulfide motif."  Biochemistry 43, 6005-6012 (2004).
PubMed: 15147184

Assembly members:

Assembly members:
Eucommia Antifungal Peptide 2, polymer, 41 residues, 4158.77 Da.

Natural source:

Natural source:   Common Name: Hardy Rubber Tree   Taxonomy ID: 4392   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Eucommia ulmoides

Experimental source:

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Eucommia Antifungal Peptide 2: XTCASRCPRPCNAGLCCSIY GYCGSGAAYCGAGNCRCQCR G

Data sets:
Data typeCount
1H chemical shifts602

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1EAFP2 monomer1

Entities:

Entity 1, EAFP2 monomer 41 residues - 4158.77 Da.

1   PCATHRCYSALASERARGCYSPROARGPRO
2   CYSASNALAGLYLEUCYSCYSSERILETYR
3   GLYTYRCYSGLYSERGLYALAALATYRCYS
4   GLYALAGLYASNCYSARGCYSGLNCYSARG
5   GLY

Samples:

sample_1: Eucommia Antifungal Peptide 25.8 – 6.2 mM

sample_2: Eucommia Antifungal Peptide 25.8 – 6.2 mM; H2O 90%; D2O 10%

sample_3: Eucommia Antifungal Peptide 25.8 – 6.2 mM; D2O 100%

Ex-Cond_1: pH: 5.6 na; temperature: 300 K

Ex-Cond_2: pH: 5.6 na; temperature: 290 K

Experiments:

NameSampleSample stateSample conditions
DQF-COSYnot availablenot availablenot available
TOCSYnot availablenot availablenot available
NOESYnot availablenot availablenot available

Software:

SPARKY v3.105 - spectra view, peak assignments, peak integrations.

NMR spectrometers:

  • Bruker DMX 500 MHz

Related Database Links:

PDB
SP P83596 P83597
AlphaFold P83596 P83597