BMRB Entry 53982
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR53982
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
All files associated with the entry
Citation: Kowalczyk, Alex; Morrison, Emma. "Differential histone tail citrullination by PAD Enzymes observed via NMR spectroscopy
" J. Biol. Chem. ., .-..
Assembly members:
entity_1, polymer, 28 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET3a
Entity Sequences (FASTA):
entity_1: SGXGKQGGKAXAKAKTXSSX
AGLQYPVG
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 48 |
| 15N chemical shifts | 25 |
| 1H chemical shifts | 25 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | PAD1 citrullinated histone H2A(1-28) F25Y | 1 |
Entities:
Entity 1, PAD1 citrullinated histone H2A(1-28) F25Y 28 residues - Formula weight is not available
| 1 | SER | GLY | CIR | GLY | LYS | GLN | GLY | GLY | LYS | ALA | ||||
| 2 | CIR | ALA | LYS | ALA | LYS | THR | CIR | SER | SER | CIR | ||||
| 3 | ALA | GLY | LEU | GLN | TYR | PRO | VAL | GLY |
Samples:
sample_1: PAD1 citrullinated histone H2A(1-28) F25Y, [U-13C; U-15N], 2 mM; MOPS 20 mM; NaOH 7 mM; EDTA 0.1 mM; TCEP 0.5 mM; KCl 100 mM; CaCl2 2 mM
sample_conditions_1: pH: 7; temperature: 283 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
| 3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCA | sample_1 | isotropic | sample_conditions_1 |
Software:
TOPSPIN - collection
NMRPipe - processing
ANALYSIS v2.5.2 - chemical shift assignment
NMR spectrometers:
- Bruker AVANCE III 600 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks