BMRB Entry 5339

Title:
NMR minimized average structure of d(CGTACG)2
Deposition date:
2002-03-04
Original release date:
2002-04-09
Authors:
Lam, S.; Ip, L.
Citation:

Citation: Lam, S.; Ip, L.. "Low Temperature Solution Structures and Base Pair Stacking of Double Helical d(CGTACG)(2)"  J. Biomol. Struct. Dyn. 19, 907-917 (2002).
PubMed: 11922844

Assembly members:

Assembly members:
d(CGTACG)2, polymer, 6 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
d(CGTACG)2: CGTACG

Data sets:
Data typeCount
1H chemical shifts45

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
15'-D(*CP*GP*TP*AP*CP*G)-3', strand A1
25'-D(*CP*GP*TP*AP*CP*G)-3', strand B1

Entities:

Entity 1, 5'-D(*CP*GP*TP*AP*CP*G)-3', strand A 6 residues - Formula weight is not available

1   DCDGDTDADCDG

Samples:

sample_1: d(CGTACG)2 6.2 mM; sodium phosphate 10 mM; D2O 100%

sample_cond_1: pH: 7.0; temperature: 288 K

Experiments:

NameSampleSample stateSample conditions
not availablesample_1not availablesample_cond_1

Software:

xwinnmr v2.1 - processing

MARDIGRAS v3.5 - data analysis

AMBER v4.0 - refinement

NMR spectrometers:

  • Bruker ARX 500 MHz