BMRB Entry 5291

Title:
Investigation of Penetratin Peptides. Part 1: The Environment Dependent Conformational Properties of Penetratin and two of its Derivatives
Deposition date:
2002-02-15
Original release date:
2002-03-29
Authors:
Czajlik, Andras; Mesko, Eszter; Penke, Botond; Perczel, Andras
Citation:

Citation: Czajlik, Andras; Mesko, Eszter; Penke, Botond; Perczel, Andras. "Investigation of Penetratin Peptides. Part 1: The Environment Dependent Conformational Properties of Penetratin and two of its Derivatives"  J. Pept. Sci. 8, 151-171 (2002).
PubMed: 11991205

Assembly members:

Assembly members:
12 amino acid long derivative of the third helix of Antennapedia homeodomain, polymer, 12 residues, 1716 Da.

Natural source:

Natural source:   Common Name: fruit fly   Taxonomy ID: 7227   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Drosophila melanogaster

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
12 amino acid long derivative of the third helix of Antennapedia homeodomain: RQIKIWFRKWKK

Data sets:
Data typeCount
1H chemical shifts119

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1penetratin 121

Entities:

Entity 1, penetratin 12 12 residues - 1716 Da.

1   ARGGLNILELYSILETRPPHEARGLYSTRP
2   LYSLYS

Samples:

sample_1: 12 amino acid long derivative of the third helix of Antennapedia homeodomain 1.5 mM; trifluoroethanol 90%; water 10%

cond_set_1: pH: 3; temperature: 300 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H DQF-COSYnot availablenot availablenot available
2D 1H-1H TOCSYnot availablenot availablenot available
2D 1H-1H NOESYnot availablenot availablenot available

Software:

FELIX v97.2 - peak assignment, peak picking, raw spectral data processing

NMR spectrometers:

  • Bruker DRX 500 MHz

Related Database Links:

BMRB 5291
PDB