BMRB Entry 51152

Title:
alpha-Synuclein at low pH and high Temperature
Deposition date:
2021-10-22
Original release date:
2023-04-05
Authors:
Schwarz, Thomas; Konrat, Robert
Citation:

Citation: Schwarz, Thomas; Beier, Andreas; Ledolter, Karin; Gossenreiter, Thomas; Hofurthner, Theresa; Hartl, Markus; Baker, Terry; Taylor, Richard; Konrat, Robert. "High-Resolution Structural Information of Membrane-bound alpha-Synuclein provides Insight into the MoA of the Anti-Parkinson Drug UCB0599"  Proc. Nat. Acad. Sci. 120, e2201910120-e2201910120 (2023).
PubMed: 37027427

Assembly members:

Assembly members:
entity_1, polymer, 140 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET-3d

Data sets:
Data typeCount
13C chemical shifts399
15N chemical shifts133
1H chemical shifts133

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1aSyn1

Entities:

Entity 1, aSyn 140 residues - Formula weight is not available

WT protein expressed without tag, sequence numbering from first expressed residue.

1   METASPVALPHEMETLYSGLYLEUSERLYS
2   ALALYSGLUGLYVALVALALAALAALAGLU
3   LYSTHRLYSGLNGLYVALALAGLUALAALA
4   GLYLYSTHRLYSGLUGLYVALLEUTYRVAL
5   GLYSERLYSTHRLYSGLUGLYVALVALHIS
6   GLYVALALATHRVALALAGLULYSTHRLYS
7   GLUGLNVALTHRASNVALGLYGLYALAVAL
8   VALTHRGLYVALTHRALAVALALAGLNLYS
9   THRVALGLUGLYALAGLYSERILEALAALA
10   ALATHRGLYPHEVALLYSLYSASPGLNLEU
11   GLYLYSASNGLUGLUGLYALAPROGLNGLU
12   GLYILELEUGLUASPMETPROVALASPPRO
13   ASPASNGLUALATYRGLUMETPROSERGLU
14   GLUGLYTYRGLNASPTYRGLUPROGLUALA

Samples:

sample_1: Synuclein, [U-98% 13C; U-98% 15N], 250 uM; sodium phosphate 10 mM; EDTA 100 uM; sodium azide 100 uM

sample_conditions_1: ionic strength: 10.2 mM; pH: 5.5; pressure: 1 atm; temperature: 323 K

Experiments:

NameSampleSample stateSample conditions
3D HN(CA)COsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D HNCACBsample_1isotropicsample_conditions_1
3D HN(CO)CACBsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1

Software:

CcpNMR v2.5 - chemical shift assignment

NMR spectrometers:

  • Bruker AVANCE NEO 600 MHz

Related Database Links:

UNP P37840
AlphaFold Q6IAU6

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks