Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50357
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Citation: Wurm, Jan Philip. "Assignment of the Ile, Leu, Val, Met and Ala methyl group resonances of the DEAD-box RNA helicase DbpA from E. coli" Biomol. NMR Assign. 15, 121-128 (2021).
PubMed: 33277687
Assembly members:
entity_1, polymer, 457 residues, Formula weight is not available
Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pETM11
Data type | Count |
13C chemical shifts | 246 |
15N chemical shifts | 415 |
1H chemical shifts | 1150 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | full length DbpA | 1 |
Entity 1, full length DbpA 457 residues - Formula weight is not available
Residues 1-457 (full length) DbpA
1 | MET | THR | ALA | PHE | SER | THR | LEU | ASN | VAL | LEU | ||||
2 | PRO | PRO | ALA | GLN | LEU | THR | ASN | LEU | ASN | GLU | ||||
3 | LEU | GLY | TYR | LEU | THR | MET | THR | PRO | VAL | GLN | ||||
4 | ALA | ALA | ALA | LEU | PRO | ALA | ILE | LEU | ALA | GLY | ||||
5 | LYS | ASP | VAL | ARG | VAL | GLN | ALA | LYS | THR | GLY | ||||
6 | SER | GLY | LYS | THR | ALA | ALA | PHE | GLY | LEU | GLY | ||||
7 | LEU | LEU | GLN | GLN | ILE | ASP | ALA | SER | LEU | PHE | ||||
8 | GLN | THR | GLN | ALA | LEU | VAL | LEU | CYS | PRO | THR | ||||
9 | ARG | GLU | LEU | ALA | ASP | GLN | VAL | ALA | GLY | GLU | ||||
10 | LEU | ARG | ARG | LEU | ALA | ARG | PHE | LEU | PRO | ASN | ||||
11 | THR | LYS | ILE | LEU | THR | LEU | CYS | GLY | GLY | GLN | ||||
12 | PRO | PHE | GLY | MET | GLN | ARG | ASP | SER | LEU | GLN | ||||
13 | HIS | ALA | PRO | HIS | ILE | ILE | VAL | ALA | THR | PRO | ||||
14 | GLY | ARG | LEU | LEU | ASP | HIS | LEU | GLN | LYS | GLY | ||||
15 | THR | VAL | SER | LEU | ASP | ALA | LEU | ASN | THR | LEU | ||||
16 | VAL | MET | ASP | GLU | ALA | ASP | ARG | MET | LEU | ASP | ||||
17 | MET | GLY | PHE | SER | ASP | ALA | ILE | ASP | ASP | VAL | ||||
18 | ILE | ARG | PHE | ALA | PRO | ALA | SER | ARG | GLN | THR | ||||
19 | LEU | LEU | PHE | SER | ALA | THR | TRP | PRO | GLU | ALA | ||||
20 | ILE | ALA | ALA | ILE | SER | GLY | ARG | VAL | GLN | ARG | ||||
21 | ASP | PRO | LEU | ALA | ILE | GLU | ILE | ASP | SER | THR | ||||
22 | ASP | ALA | LEU | PRO | PRO | ILE | GLU | GLN | GLN | PHE | ||||
23 | TYR | GLU | THR | SER | SER | LYS | GLY | LYS | ILE | PRO | ||||
24 | LEU | LEU | GLN | ARG | LEU | LEU | SER | LEU | HIS | GLN | ||||
25 | PRO | SER | SER | CYS | VAL | VAL | PHE | CYS | ASN | THR | ||||
26 | LYS | LYS | ASP | CYS | GLN | ALA | VAL | CYS | ASP | ALA | ||||
27 | LEU | ASN | GLU | VAL | GLY | GLN | SER | ALA | LEU | SER | ||||
28 | LEU | HIS | GLY | ASP | LEU | GLU | GLN | ARG | ASP | ARG | ||||
29 | ASP | GLN | THR | LEU | VAL | ARG | PHE | ALA | ASN | GLY | ||||
30 | SER | ALA | ARG | VAL | LEU | VAL | ALA | THR | ASP | VAL | ||||
31 | ALA | ALA | ARG | GLY | LEU | ASP | ILE | LYS | SER | LEU | ||||
32 | GLU | LEU | VAL | VAL | ASN | PHE | GLU | LEU | ALA | TRP | ||||
33 | ASP | PRO | GLU | VAL | HIS | VAL | HIS | ARG | ILE | GLY | ||||
34 | ARG | THR | ALA | ARG | ALA | GLY | ASN | SER | GLY | LEU | ||||
35 | ALA | ILE | SER | PHE | CYS | ALA | PRO | GLU | GLU | ALA | ||||
36 | GLN | ARG | ALA | ASN | ILE | ILE | SER | ASP | MET | LEU | ||||
37 | GLN | ILE | LYS | LEU | ASN | TRP | GLN | THR | PRO | PRO | ||||
38 | ALA | ASN | SER | SER | ILE | ALA | THR | LEU | GLU | ALA | ||||
39 | GLU | MET | ALA | THR | LEU | CYS | ILE | ASP | GLY | GLY | ||||
40 | LYS | LYS | ALA | LYS | MET | ARG | PRO | GLY | ASP | VAL | ||||
41 | LEU | GLY | ALA | LEU | THR | GLY | ASP | ILE | GLY | LEU | ||||
42 | ASP | GLY | ALA | ASP | ILE | GLY | LYS | ILE | ALA | VAL | ||||
43 | HIS | PRO | ALA | HIS | VAL | TYR | VAL | ALA | VAL | ARG | ||||
44 | GLN | ALA | VAL | ALA | HIS | LYS | ALA | TRP | LYS | GLN | ||||
45 | LEU | GLN | GLY | GLY | LYS | ILE | LYS | GLY | LYS | THR | ||||
46 | CYS | ARG | VAL | ARG | LEU | LEU | LYS |
sample_1: sodium chloride 125 mM; HEPES 25 mM; DTT 1 mM; DbpA full length, [U-15N; U-2H; 95% 1H13CD-Ile,Leu; 95% 1H13CG-Val, 1H13CB-Ala, 1H13CE-Met], 250 uM
sample_conditions_1: ionic strength: 140 mM; pH: 7.3; pressure: 1 atm; temperature: 298 K
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-13C HSQC aliphatic | sample_1 | isotropic | sample_conditions_1 |
3D 1H-13C-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
3D 13C-13C-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
TOPSPIN v4.0.2 - processing
CARA - chemical shift assignment
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