BMRB Entry 27352

Name: Backbone 1H, 13C, and 15N assignments of the extracellular region of human Fc receptor IIIb
Published: 2018-02-20

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR27352

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C, and 15N assignments of the extracellular region of human Fc receptor IIIb

Deposition date:

2018-01-04

Original release date:

2018-02-20

Authors:

Yogo, Rina; Yanaka, Saeko; Kato, Koichi

Citation:

Citation: Yogo, Rina; Yanaka, Saeko; Kato, Koichi. "Backbone 1H, 13C, and 15N assignments of the extracellular region of human Fcgammaa receptor IIIb" Biomol. NMR Assignments 12, 201-204 (2018).
PubMed: 29453714

Assembly members:

Assembly members:
Fc_receptor_IIIb, polymer, 187 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pet28b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Fc_receptor_IIIb: MARTEDLPKAVVFLEPQWYS VLEKDSVTLKCQGAYSPEDN STQWFHNESLISSQASSYFI DAATVNDSGEYRCQTNLSTL SDPVQLEVHIGWLLLQAPRW VFKEEDPIHLRCHSWKNTAL HKVTYLQNGKDRKYFHHNSD FHIPKATLKDSGSYFCRGLV GSKNVSSETVNITITQAAAL EHHHHHH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	501
15N chemical shifts	167
1H chemical shifts	167

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Fc receptor IIIb	1

Entities:

Entity 1, Fc receptor IIIb 187 residues - Formula weight is not available

1

MET

ALA

ARG

THR

GLU

ASP

LEU

PRO

LYS

ALA

2

VAL

PHE

LEU

GLU

PRO

GLN

TRP

TYR

SER

3

VAL

LEU

GLU

LYS

ASP

SER

VAL

THR

LEU

LYS

4

CYS

GLN

GLY

ALA

TYR

SER

PRO

GLU

ASP

ASN

5

SER

THR

GLN

TRP

PHE

HIS

ASN

GLU

SER

LEU

6

ILE

SER

GLN

ALA

SER

TYR

PHE

ILE

7

ASP

ALA

THR

VAL

ASN

ASP

SER

GLY

GLU

8

TYR

ARG

CYS

GLN

THR

ASN

LEU

SER

THR

LEU

9

SER

ASP

PRO

VAL

GLN

LEU

GLU

VAL

HIS

ILE

10

GLY

TRP

LEU

GLN

ALA

PRO

ARG

TRP

11

VAL

PHE

LYS

GLU

ASP

PRO

ILE

HIS

LEU

12

ARG

CYS

HIS

SER

TRP

LYS

ASN

THR

ALA

LEU

13

HIS

LYS

VAL

THR

TYR

LEU

GLN

ASN

GLY

LYS

14

ASP

ARG

LYS

TYR

PHE

HIS

ASN

SER

ASP

15

PHE

HIS

ILE

PRO

LYS

ALA

THR

LEU

LYS

ASP

16

SER

GLY

SER

TYR

PHE

CYS

ARG

GLY

LEU

VAL

17

GLY

SER

LYS

ASN

VAL

SER

GLU

THR

VAL

18

ASN

ILE

THR

ILE

THR

GLN

ALA

LEU

19

GLU

HIS

Samples:

sample_1: Fc receptor IIIb, [U-100% 13C; U-100% 15N] partially deuterated, 0.2 mM; sodium chloride 50 mM; sodium phosphate 5 mM

sample_conditions_1: pH: 6.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N trHSQC	sample_1	isotropic	sample_conditions_1
3D trCBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D trHNCACB	sample_1	isotropic	sample_conditions_1
3D trHN(CO)CA	sample_1	isotropic	sample_conditions_1
3D trHNCA	sample_1	isotropic	sample_conditions_1
3D trHNCO	sample_1	isotropic	sample_conditions_1
3D trHCACO	sample_1	isotropic	sample_conditions_1
3D trHNCANNH	sample_1	isotropic	sample_conditions_1

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMR spectrometers:

Bruker Avance 800 MHz
Bruker Avance 950 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks