BMRB Entry 4071

Title:
1H Chemical Shift Assignments and Interproton 3JNHA Coupling Constants of Raphanus sativus Antifungal Protein 1 (Rs-AFP1), a Plant Defensin Isolated from Seeds of Radish
Deposition date:
1997-11-07
Original release date:
2008-07-16
Authors:
Fant, Franky; Vranken, Wim; Martins, Jose; Borremans, Frans
Citation:

Citation: Fant, Franky; Vranken, Wim; Martins, Jose; Borremans, Frans. "1H Chemical Shift Assignments and Interproton 3JNHA Coupling Constants of Raphanus sativus Antifungal Protein 1 (Rs-AFP1), a Plant Defensin Isolated from Seeds of Radish"  Bull. Soc. Chim. Belg. 106, 51-57 (1997).

Assembly members:

Assembly members:
Antifungal_Protein_1, polymer, 51 residues, 5662.5 Da.

Natural source:

Natural source:   Common Name: radish   Taxonomy ID: 3726   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Raphanus sativus

Experimental source:

Experimental source:   Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Antifungal_Protein_1: XKLCERPSGTWSGVCGNNNA CKNQCINLEKARHGSCNYVF PAHKCICYFPC

Data sets:
Data typeCount
1H chemical shifts305
coupling constants44

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Rs-AFP11

Entities:

Entity 1, Rs-AFP1 51 residues - 5662.5 Da.

1   PCALYSLEUCYSGLUARGPROSERGLYTHR
2   TRPSERGLYVALCYSGLYASNASNASNALA
3   CYSLYSASNGLNCYSILEASNLEUGLULYS
4   ALAARGHISGLYSERCYSASNTYRVALPHE
5   PROALAHISLYSCYSILECYSTYRPHEPRO
6   CYS

Samples:

sample_one: Antifungal_Protein_1 1.3 mM; H2O 90%; D2O 10%

sample_conditions_one: pH: 4.2; temperature: 305 K

Experiments:

NameSampleSample stateSample conditions
not availablesample_onenot availablesample_conditions_one

Software:

PRONTO v921101, Carlsberg A/S and CRI A/S - assignments and integration

NMR spectrometers:

    Related Database Links:

    PDB
    DBJ BAJ41194 BAM15659
    EMBL CAA63009 CAC37558 CDX68117 CDX73205 CDX85923
    GB AAA69541 AAB22709 AAB25086 AAB25088 AAD02502
    REF NP_565119 XP_002887615 XP_006390974 XP_009123203 XP_009128139
    SP P30224 P30227 P30231 P69240 P69241
    AlphaFold P69240 P30224 P30227 P30231 P69241