BMRB Entry 18036

Title:
UNAC Tetraloops: To What Extent Can They Mimic GNRA Tetraloops
Deposition date:
2011-11-01
Original release date:
2012-05-22
Authors:
Zhao, Q.; Huang, H.; Nagaswamy, U.; Xia, Y.; Gao, X.; Fox, George
Citation:

Citation: Zhao, Qin; Huang, Hung-Chung; Nagaswamy, Uma; Xia, Youlin; Gao, Xiaolian; Fox, George. "UNAC tetraloops: to what extent do they mimic GNRA tetraloops?"  Biopolymers 97, 617-628 (2012).
PubMed: 22605553

Assembly members:

Assembly members:
UCAC, polymer, 22 residues, 7093.17192 Da.

Natural source:

Natural source:   Common Name: Thermus thermophilus   Taxonomy ID: 274   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Thermus thermophilus

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
UCAC: GGACCCGGCUCACGCUGGGU CC

Data sets:
Data typeCount
1H chemical shifts89

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1UCAC1

Entities:

Entity 1, UCAC 22 residues - 7093.17192 Da.

1   GGACCCGGCU
2   CACGCUGGGU
3   CC

Samples:

sample_1: UCAC, [U-13C; U-15N], 0.3 mM; D2O 99.96%

sample_conditions_1: pH: 7.000; pressure: 1 atm; temperature: 298.000 K

Experiments:

NameSampleSample stateSample conditions
experiment_1sample_1solutionsample_conditions_1

Software:

AutoDep v4.3, AutoDep - chemical shift assignment

CNS vany, BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- - chemical shift assignment

NMR spectrometers:

  • Bruker Avance 600 MHz

Related Database Links:

PDB