BMRB Entry 7400

Name: Solution structure of rhodostomin P48A mutant
Published: 2009-10-12

Click here to enlarge.

PDB ID: 2pji
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR7400
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution structure of rhodostomin P48A mutant

Deposition date:

2007-06-29

Original release date:

2009-10-12

Authors:

Chuang, W.; Liu, Y.; Shiu, J.

Citation:

Citation: Chuang, W.; Chen, C.; Shiu, J.; Liu, Y.; Hsieh, Y.; Chang, Y.; Chen, Y.; Lo, S.. "Dynamic Properties of the RGD Motif of Disintegrin Modulate its Recognition to Integrin a5b1" .

Assembly members:

Assembly members:
Rhodostoxin-disintegrin_rhodostomin, polymer, 68 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Malayan pit viper Taxonomy ID: 8717 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Calloselasma rhodostoma

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Rhodostoxin-disintegrin_rhodostomin: GKECDCSSPENPCCDAATCK LRPGAQCGEGLCCEQCKFSR AGKICRIARGDMPDDRCTGQ SADCPRYH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
15N chemical shifts	67
1H chemical shifts	372

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Rhodostoxin-disintegrin_rhodostomin	1

Entities:

Entity 1, Rhodostoxin-disintegrin_rhodostomin 68 residues - Formula weight is not available

1

GLY

LYS

GLU

CYS

ASP

CYS

SER

PRO

GLU

2

ASN

PRO

CYS

ASP

ALA

THR

CYS

LYS

3

LEU

ARG

PRO

GLY

ALA

GLN

CYS

GLY

GLU

GLY

4

LEU

CYS

GLU

GLN

CYS

LYS

PHE

SER

ARG

5

ALA

GLY

LYS

ILE

CYS

ARG

ILE

ALA

ARG

GLY

6

ASP

MET

PRO

ASP

ARG

CYS

THR

GLY

GLN

7

SER

ALA

ASP

CYS

PRO

ARG

TYR

HIS

Name	Sample	Sample state	Sample conditions
2D NOESY	not available	isotropic	sample_conditions_1
2D TOCSY	not available	isotropic	sample_conditions_1
2D NOESY	not available	isotropic	sample_conditions_1
2D TOCSY	not available	isotropic	sample_conditions_1
3D_15N-separated_NOESY	not available	isotropic	sample_conditions_1
3D_15N-separated_TOCSY	not available	isotropic	sample_conditions_1
HNHA	not available	isotropic	sample_conditions_1
2D HSQC	not available	isotropic	sample_conditions_1

BMRB	17963 19210 19211 19212 2856 5117 5949 7399
PDB	1N4Y 1Q7I 2LJV 2M75 2M7F 2M7H 2PJF 2PJG 2PJI 4M4C
GB	AAA49196 AAA57568
SP	P30403

BMRB Entry 7400

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: