BMRB Entry 7395

Name: Solution Structure of RWD/GI domain of Saccharomyces cerevisiae GCN2
Published: 2015-06-16

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PDB ID: 2yz0
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7395
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of RWD/GI domain of Saccharomyces cerevisiae GCN2

Deposition date:

2007-06-29

Original release date:

2015-06-16

Authors:

Ogura, K.; Torikai, S.; Kumeta, H.; Inagaki, F.

Citation:

Citation: Ogura, K.; Torikai, S.; Kumeta, H.; Inagaki, F.. "Solution structure of RWD/GI domain of Saccharomyces cerevisiae GCN2" .

Assembly members:

Assembly members:
Serine-threonine-protein_kinase_GCN2, polymer, . residues, Formula weight is not available

Natural source:

Natural source: Common Name: baker's yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Serine-threonine-protein_kinase_GCN2: MSLSHLTLDQYYEIQCNELE AIRSIYMDDFTDLTKRKSSW DKQPQIIFEITLRSVDKEPV ESSITLHFAMTPMYPYTAPE IEFKNVQNVMDSQLQMLKSE FKKIHNTSRGQEIIFEITSF TQEKLDEFQNVVNTQSLE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	424
15N chemical shifts	130
1H chemical shifts	919

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	RWD/GI domain	1

Entities:

Entity 1, RWD/GI domain - Formula weight is not available

1

MET

SER

LEU

SER

HIS

LEU

THR

LEU

ASP

GLN

2

TYR

GLU

ILE

GLN

CYS

ASN

GLU

LEU

GLU

3

ALA

ILE

ARG

SER

ILE

TYR

MET

ASP

PHE

4

THR

ASP

LEU

THR

LYS

ARG

LYS

SER

TRP

5

ASP

LYS

GLN

PRO

GLN

ILE

PHE

GLU

ILE

6

THR

LEU

ARG

SER

VAL

ASP

LYS

GLU

PRO

VAL

7

GLU

SER

ILE

THR

LEU

HIS

PHE

ALA

MET

8

THR

PRO

MET

TYR

PRO

TYR

THR

ALA

PRO

GLU

9

ILE

GLU

PHE

LYS

ASN

VAL

GLN

ASN

VAL

MET

10

ASP

SER

GLN

LEU

GLN

MET

LEU

LYS

SER

GLU

11

PHE

LYS

ILE

HIS

ASN

THR

SER

ARG

GLY

12

GLN

GLU

ILE

PHE

GLU

ILE

THR

SER

PHE

13

THR

GLN

GLU

LYS

LEU

ASP

GLU

PHE

GLN

ASN

14

VAL

ASN

THR

GLN

SER

LEU

GLU

Samples:

sample: RWD/GI domain, [U-15N; U-13C], 1 mM; phosphate buffer 20 mM; H2O 90%; D2O 10%

sample_conditions_1: pH: 6.5; pressure: 1 .; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D_13C-separated_NOESY	sample	isotropic	sample_conditions_1
3D_15N-separated_NOESY	sample	isotropic	sample_conditions_1

Software:

VNMR - collection

NMRPipe - processing

DYANA - refinement, structure solution

NMR spectrometers:

Varian INOVA 800 MHz
Varian INOVA 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks