BMRB Entry 7314

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PDB ID: 2e34
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7314
MolProbity Validation Chart

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Title:
The backbone chemical shifts of ribosomal protein L11 in the complex with rRNA
Deposition date:
2006-10-13
Original release date:
2007-05-04
Authors:
Lee, Donghan; Wang, Yun-Xing
Citation:

Citation: Lee, D.; Walsh, JD.; Yu, P.; Markus, MA.; Choli-Papadopoulou, T.; Schwieters, CD.; Krueger, S.; Draper, DE.; Wang, YX.. "The structure of free L11 and functional dyanamics of L11 in free, L11-rRNA(58nt) binary and L11-rRNA(58nt)-thiostrepton ternary complexes"  J. Mol. Biol. 367, 1007-1022 (2007).
PubMed: 17292917

Assembly members:

Assembly members:
L11, polymer, 147 residues, Formula weight is not available
RNA, polymer, 58 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Thermus thermophilus   Taxonomy ID: 274   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Thermus thermophilus

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
L11: MKKVVAVVKLQLPAGKATPA PPVGPALGQHGANIMEFVKA FNAATANMGDAIVPVEITIY ADRSFTFVTKTPPASYLIRK AAGLEKGAHKPGREKVGRIT WEQVLEIAKQKMPDLNTTDL EAAARMIAGSARSMGVEVVG APEVKDA
RNA: GCCAGGAUGUUGGCUUAGAA GCAGCCAUCAUUUAAAGAAA GCGUAAUAGCUCACUGGU

Data sets:
Data typeCount
13C chemical shifts350
15N chemical shifts136
1H chemical shifts406

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1L111
2RNA2

Entities:

Entity 1, L11 147 residues - Formula weight is not available

1   METLYSLYSVALVALALAVALVALLYSLEU
2   GLNLEUPROALAGLYLYSALATHRPROALA
3   PROPROVALGLYPROALALEUGLYGLNHIS
4   GLYALAASNILEMETGLUPHEVALLYSALA
5   PHEASNALAALATHRALAASNMETGLYASP
6   ALAILEVALPROVALGLUILETHRILETYR
7   ALAASPARGSERPHETHRPHEVALTHRLYS
8   THRPROPROALASERTYRLEUILEARGLYS
9   ALAALAGLYLEUGLULYSGLYALAHISLYS
10   PROGLYARGGLULYSVALGLYARGILETHR
11   TRPGLUGLNVALLEUGLUILEALALYSGLN
12   LYSMETPROASPLEUASNTHRTHRASPLEU
13   GLUALAALAALAARGMETILEALAGLYSER
14   ALAARGSERMETGLYVALGLUVALVALGLY
15   ALAPROGLUVALLYSASPALA

Entity 2, RNA 58 residues - Formula weight is not available

1   GCCAGGAUGU
2   UGGCUUAGAA
3   GCAGCCAUCA
4   UUUAAAGAAA
5   GCGUAAUAGC
6   UCACUGGU

Related Database Links:

BMRB 4965 7315
PDB 2E34 2E35 2E36 2H8W 2HGJ 2HGQ 2HGU 2J01 2J03 2KLM 2NXN 2WH2 2WH4 2WRJ 2WRL 2X9S 2X9U 2XTG 2XUX 3CJQ 3CJR 3CJT 3EGV 3F1F 3F1H 3FIN 3I8I 4JUX 4KBU 4KBW 4KCZ 4KD2 4KD9 4KDB 4KDH 4KDK 4KFI 4KFL 4QJS
DBJ BAD70070
EMBL CAA57138
GB AAS82080 ADW20820 AEG32574 AEV17153 AFH38065
PIR S66576
PRF 2004301A
REF WP_008630514 WP_011174097 WP_014516502 WP_014628913 WP_015716108
SP P36238 P62442 Q5SLP6
AlphaFold P36238 P62442 Q5SLP6

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks