BMRB Entry 7302

Name: The PX domain of Sorting Nexin 1 (SNX1)
Published: 2006-11-14

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PDB ID: 2i4k
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7302
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

The PX domain of Sorting Nexin 1 (SNX1)

Deposition date:

2006-09-25

Original release date:

2006-11-14

Authors:

Watson, Martin; Waltho, Jonathon; Hounslow, Andrea

Citation:

Citation: Zhong, Qi; Watson, Martin; Lazar, Cheri; Hounslow, Andrea; Waltho, Jonathon; Gill, Gordon. "Determinants of the Localization of Sorting Nexin 1" Mol. Biol. Cell 16, 2049-2057 (2005).
PubMed: 15673616

Assembly members:

Assembly members:
SNX1-PX, polymer, 128 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SNX1-PX: QFDLTVGITDPEKIGDGMNA YVAYKVTTQTSLPLFRSKQF AVKRRFSDFLGLYEKLSEKH SQNGFIVPPPPEKSLIGMTK VKVGKEDSSSAEFLEKRRAA LERYLQRIVNHPTMLQDPDV REFLEKEE

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	551
15N chemical shifts	123
1H chemical shifts	760

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SNX1-PX	1

Entities:

Entity 1, SNX1-PX 128 residues - Formula weight is not available

1

GLN

PHE

ASP

LEU

THR

VAL

GLY

ILE

THR

ASP

2

PRO

GLU

LYS

ILE

GLY

ASP

GLY

MET

ASN

ALA

3

TYR

VAL

ALA

TYR

LYS

VAL

THR

GLN

THR

4

SER

LEU

PRO

LEU

PHE

ARG

SER

LYS

GLN

PHE

5

ALA

VAL

LYS

ARG

PHE

SER

ASP

PHE

LEU

6

GLY

LEU

TYR

GLU

LYS

LEU

SER

GLU

LYS

HIS

7

SER

GLN

ASN

GLY

PHE

ILE

VAL

PRO

8

PRO

GLU

LYS

SER

LEU

ILE

GLY

MET

THR

LYS

9

VAL

LYS

VAL

GLY

LYS

GLU

ASP

SER

10

ALA

GLU

PHE

LEU

GLU

LYS

ARG

ALA

11

LEU

GLU

ARG

TYR

LEU

GLN

ARG

ILE

VAL

ASN

12

HIS

PRO

THR

MET

LEU

GLN

ASP

PRO

ASP

VAL

13

ARG

GLU

PHE

LEU

GLU

LYS

GLU

Samples:

sample_1: SNX1-PX, [U-13C; U-15N], 1 mM; Phosphate 20 mM; NaCl 100 mM; NaN3 1 mM; D20 10%

conditions_1: pH: 6.5; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
15N-HSQC	not available	not available	not available
13C-HSQC	not available	not available	not available
HNCA	not available	not available	not available
HNCO	not available	not available	not available
HNCACB	not available	not available	not available
CBCA(CO)NH	not available	not available	not available
HN(CA)CO	not available	not available	not available
CCH-TOCSY	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
15N,13C-NOESY-HSQC	not available	not available	not available

Software:

FELIX v2000, Accelrys -

NMR spectrometers:

Bruker DRX 500 MHz
Bruker DRX 600 MHz
Bruker DRX 800 MHz

PDB	2I4K
DBJ	BAB20283 BAB83537 BAC87312 BAD92250 BAD96281
EMBL	CAH89408 CAH89409
GB	AAA98672 AAC17182 AAC17183 AAD38805 AAG59616
REF	NP_001039572 NP_001127143 NP_001229862 NP_001253779 NP_001274601
SP	Q05B62 Q13596 Q4R503 Q5RFP8 Q99N27
TPG	DAA25321
AlphaFold	Q05B62 Q13596 Q4R503 Q5RFP8 Q99N27