BMRB Entry 7194
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PDB ID: 2hgh
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7194
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Lee, Brian; Xu, Jing; Clarkson, Bryan; Martinez-Yamout, Maria; Dyson, H.; Case, Dave; Gottesfeld, Joel; Wright, Peter. "Induced Fit and 'Lock and Key' Recognition of 5 S RNA by Zinc Fingers of Transcription Factor IIIA" J. Mol. Biol. 357, 275-291 (2006).
PubMed: 16405997
Assembly members:
5S rRNA 55mer, polymer, 55 residues, Formula weight is not available
TFIIIA zf46, polymer, 87 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.
Natural source: Common Name: African clawed frog Taxonomy ID: 8355 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Xenopus laevis
Experimental source: Production method: enzymatic semisynthesis
Entity Sequences (FASTA):
5S rRNA 55mer: GGGCCACACCUCUUGGGCCU
GGUUAGUACCUGUUCGCUGG
GAAUACCAGGUGCCC
TFIIIA zf46: MYVCHFENCGKAFKKHNQLK
VHQFSHTQQLPYECPHEGCD
KRFSLPSRLKRHEKVHAGYP
CKKDDSCSFVGKTWTLYLKH
VAECHQD
- assigned_chemical_shifts
- RDCs
| Data type | Count |
| 13C chemical shifts | 297 |
| 15N chemical shifts | 97 |
| 1H chemical shifts | 583 |
| residual dipolar couplings | 98 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | 5S rRNA | 1 |
| 2 | TFIIIA zf46 | 2 |
| 3 | ZINC (II) ION, 1 | 3 |
| 4 | ZINC (II) ION, 2 | 3 |
| 5 | ZINC (II) ION, 3 | 3 |
Entities:
Entity 1, 5S rRNA 55 residues - Formula weight is not available
| 1 | G | G | G | C | C | A | C | A | C | C | ||||
| 2 | U | C | U | U | G | G | G | C | C | U | ||||
| 3 | G | G | U | U | A | G | U | A | C | C | ||||
| 4 | U | G | U | U | C | G | C | U | G | G | ||||
| 5 | G | A | A | U | A | C | C | A | G | G | ||||
| 6 | U | G | C | C | C |
Entity 2, TFIIIA zf46 87 residues - Formula weight is not available
| 1 | MET | TYR | VAL | CYS | HIS | PHE | GLU | ASN | CYS | GLY | ||||
| 2 | LYS | ALA | PHE | LYS | LYS | HIS | ASN | GLN | LEU | LYS | ||||
| 3 | VAL | HIS | GLN | PHE | SER | HIS | THR | GLN | GLN | LEU | ||||
| 4 | PRO | TYR | GLU | CYS | PRO | HIS | GLU | GLY | CYS | ASP | ||||
| 5 | LYS | ARG | PHE | SER | LEU | PRO | SER | ARG | LEU | LYS | ||||
| 6 | ARG | HIS | GLU | LYS | VAL | HIS | ALA | GLY | TYR | PRO | ||||
| 7 | CYS | LYS | LYS | ASP | ASP | SER | CYS | SER | PHE | VAL | ||||
| 8 | GLY | LYS | THR | TRP | THR | LEU | TYR | LEU | LYS | HIS | ||||
| 9 | VAL | ALA | GLU | CYS | HIS | GLN | ASP |
Entity 3, ZINC (II) ION, 1 - Zn - 65.409 Da.
| 1 | ZN |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks