BMRB Entry 7072

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7072

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Title:
Backbone 1H, 13C, and 15N Chemical Shift Assignments for the PDZ domain of GOPC
Deposition date:
2006-04-14
Original release date:
2006-04-24
Authors:
Li, Xiang; Zhang, Jiahai; Wu, Jihui; Shi, Yunyu
Citation:

Citation: Li, Xiang; Zhang, Jiahai; Cao, Zanxia; Wu, Jihui; Shi, Yunyu. "Solution Structure of GOPC PDZ Domain and Its Interaction with the C-Terminal motif of Neuroligin"  Protein Sci. 15, 2149-2158 (2006).
PubMed: 16882988

Assembly members:

Assembly members:
GOPC PDZ domain, polymer, 87 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: homo spaiens   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo spaiens

Experimental source:

Experimental source:   Production method: recombinant technology   Vector: pET22(+)

Entity Sequences (FASTA):

Entity Sequences (FASTA):
GOPC PDZ domain: PIRKVLLLKEDHEGLGISIT GGKEHGVPILISEIHPGQPA DRCGGLHVGDAILAVNGVNL RDTKHKEAVTILSQQRGEIE FEVVYVA

Data sets:
Data typeCount
13C chemical shifts363
15N chemical shifts87
1H chemical shifts621

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1GOPC PDZ monomer1

Entities:

Entity 1, GOPC PDZ monomer 87 residues - Formula weight is not available

1   PROILEARGLYSVALLEULEULEULYSGLU
2   ASPHISGLUGLYLEUGLYILESERILETHR
3   GLYGLYLYSGLUHISGLYVALPROILELEU
4   ILESERGLUILEHISPROGLYGLNPROALA
5   ASPARGCYSGLYGLYLEUHISVALGLYASP
6   ALAILELEUALAVALASNGLYVALASNLEU
7   ARGASPTHRLYSHISLYSGLUALAVALTHR
8   ILELEUSERGLNGLNARGGLYGLUILEGLU
9   PHEGLUVALVALTYRVALALA

Related Database Links:

BMRB 18205
PDB 2DC2 2LOB 4E34 4E35 4JOE 4JOF 4JOG 4JOH 4JOJ 4JOK 4JOP 4JOR 4K6Y 4K72 4K75 4K76 4K78 4Q6H
DBJ BAB69946 BAC26958 BAC27058 BAC27951
EMBL CAH90325
GB AAG00571 AAG00572 AAH09553 AAH51171 AAI68160
PRF 1611455A
REF NP_001017408 NP_001101101 NP_001125151 NP_001186201 NP_001193086
SP Q5RD32 Q8BH60 Q9HD26
TPG DAA26316 DAA26317
AlphaFold Q5RD32 Q8BH60 Q9HD26

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks