BMRB Entry 6598
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6598
MolProbity Validation Chart
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NMR-STAR v3 text file.
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Citation: Papadopoulos, Evangelos; Oglecka, Kamila; Maler, Lena; Jarvet, J?ri; Wright, Peter; Dyson, H.; Graslund, Astrid. "NMR Solution Structure of the Peptide Fragment 1-30, Derived from Unprocessed
Mouse Doppel Protein, in DHPC Micelles" Biochemistry 45, 159-166 (2006).
PubMed: 16388591
Assembly members:
mouse Doppel, polymer, 30 residues, Formula weight is not available
Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus Musculus
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
mouse Doppel: MKNRLGTWWVAILCMLLASH
LSTVKARGIK
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 75 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Prion-like protein doppel | 1 |
Entities:
Entity 1, Prion-like protein doppel 30 residues - Formula weight is not available
| 1 | MET | LYS | ASN | ARG | LEU | GLY | THR | TRP | TRP | VAL | |
| 2 | ALA | ILE | LEU | CYS | MET | LEU | LEU | ALA | SER | HIS | |
| 3 | LEU | SER | THR | VAL | LYS | ALA | ARG | GLY | ILE | LYS |
Samples:
sample_1: mouse Doppel 2 mM; DHPC 100 mM; D2O 10%
sample_cond_1: pH: 3.5; temperature: 318 K; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D NOESY | not available | not available | not available |
| 2D TOCSY | not available | not available | not available |
Software:
FELIX v2000.1 - data analysis
DYANA v1.5 - structure solution, refinement
NMR spectrometers:
- Varian INOVA 800 MHz
Related Database Links:
| PDB | |
| DBJ | BAC31436 BAE36166 |
| GB | AAD52000 AAF02544 AAF02545 AAF09196 AAF09197 |
| REF | NP_001119810 NP_001265186 NP_001265187 NP_001265188 NP_001265449 |
| SP | Q9QUG3 |
| AlphaFold | Q9QUG3 |