BMRB Entry 6464
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR6464
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Waltner, J.; Peterson, F.; Lytle, B.; Volkman, B.. "Structure of the B3 domain from Arabidopsis thaliana protein At1g16640." Protein Sci. 14, 2478-2483 (2005).
PubMed: 16081658
Assembly members:
At1g16640, polymer, 104 residues, Formula weight is not available
Natural source: Common Name: Arabidopsis thaliana Taxonomy ID: 3702 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Arabidopsis thaliana
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
At1g16640: GSMADTGEVQFMKPFISEKS
SKSLEIPLGFNEYFPAPFPI
TVDLLDYSGRSWTVRMKKRG
EKVFLTVGWENFVKDNNLED
GKYLQFIYDRDRTFYVIIYG
HNMC
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 614 |
| 13C chemical shifts | 370 |
| 15N chemical shifts | 99 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | At1g16640 | 1 |
Entities:
Entity 1, At1g16640 104 residues - Formula weight is not available
| 1 | GLY | SER | MET | ALA | ASP | THR | GLY | GLU | VAL | GLN | ||||
| 2 | PHE | MET | LYS | PRO | PHE | ILE | SER | GLU | LYS | SER | ||||
| 3 | SER | LYS | SER | LEU | GLU | ILE | PRO | LEU | GLY | PHE | ||||
| 4 | ASN | GLU | TYR | PHE | PRO | ALA | PRO | PHE | PRO | ILE | ||||
| 5 | THR | VAL | ASP | LEU | LEU | ASP | TYR | SER | GLY | ARG | ||||
| 6 | SER | TRP | THR | VAL | ARG | MET | LYS | LYS | ARG | GLY | ||||
| 7 | GLU | LYS | VAL | PHE | LEU | THR | VAL | GLY | TRP | GLU | ||||
| 8 | ASN | PHE | VAL | LYS | ASP | ASN | ASN | LEU | GLU | ASP | ||||
| 9 | GLY | LYS | TYR | LEU | GLN | PHE | ILE | TYR | ASP | ARG | ||||
| 10 | ASP | ARG | THR | PHE | TYR | VAL | ILE | ILE | TYR | GLY | ||||
| 11 | HIS | ASN | MET | CYS |
Samples:
sample_1: At1g16640, [U-15N; U-13C], 0.8 mM; PO4 20 mM; NaCl 50 mM; H2O 90%; D2O 10%
sample_cond_1: pH: 7.0; temperature: 298 K; ionic strength: 70 mM; pressure: 1 atm
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D 13C-separated NOESY (aliphatic) | not available | not available | not available |
| 3D 15N-separated NOESY | not available | not available | not available |
| 3D 13C-separated NOESY (aromatic) | not available | not available | not available |
Software:
XWINNMR v3.5 - collection
NMRPipe v2004 - processing
SPSCAN - data analysis
XEASY v1.3 - data analysis
GARANT v2.1 - data analysis
CYANA v1.0.6 - structure solution
X-PLOR vNIH - refinement
NMR spectrometers:
- Bruker AVANCE 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAH30298 |
| GB | AAG10819 AAS99655 AAT41794 AEE29479 |
| REF | NP_173109 |
| SP | Q9FX77 |
| AlphaFold | Q9FX77 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks