BMRB Entry 6433

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6433

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Sequence specific 1HN, 13C and 15N resonance assignments of a novel calcium binding protein from Entamoeba histolytica

Deposition date:

2004-12-16

Original release date:

2005-07-26

Authors:

Bansal-Mutalik, Ritu; Mustafi, Sourajit; Bhattacharya, Alok; Chary, V. R.

Citation:

Citation: Bansal-Mutalik, Ritu; Mustafi, Sourajit; Bhattacharya, Alok; Chary, Kandala. "Letter to the Editor: Sequence specific 1HN, 13C and 15N resonance assignments of a novel calcium-binding protein from Entamoeba histolytica." J. Biomol. NMR 31, 379-380 (2005).
PubMed: 15929013

Assembly members:

Assembly members:
Entamoeba histolytica calcium binding protein, polymer, 134 residues, 14944 Da.
CA, non-polymer, 40.078 Da.

Natural source:

Natural source: Common Name: Escherichia coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Entamoeba histolytica calcium binding protein: MAEALFKQLDANGDGSVSYE EVKAFVSSKRPIKNEQLLQL IFKAIDIDGNGEIDLAEFTK FAAAVKEQDLSDEKVGLKIL YKLMDADGDGKLTKEEVTTF FKKFGYEKVVDQIMKADANG DGYITLEEFLAFNL

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	373
15N chemical shifts	123
1H chemical shifts	577

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	EhCaBP2	1
2	CALCIUM (II) ION	2

Entities:

Entity 1, EhCaBP2 134 residues - 14944 Da.

1

MET

ALA

GLU

ALA

LEU

PHE

LYS

GLN

LEU

ASP

2

ALA

ASN

GLY

ASP

GLY

SER

VAL

SER

TYR

GLU

3

GLU

VAL

LYS

ALA

PHE

VAL

SER

LYS

ARG

4

PRO

ILE

LYS

ASN

GLU

GLN

LEU

GLN

LEU

5

ILE

PHE

LYS

ALA

ILE

ASP

ILE

ASP

GLY

ASN

6

GLY

GLU

ILE

ASP

LEU

ALA

GLU

PHE

THR

LYS

7

PHE

ALA

VAL

LYS

GLU

GLN

ASP

LEU

8

SER

ASP

GLU

LYS

VAL

GLY

LEU

LYS

ILE

LEU

9

TYR

LYS

LEU

MET

ASP

ALA

ASP

GLY

ASP

GLY

10

LYS

LEU

THR

LYS

GLU

VAL

THR

PHE

11

PHE

LYS

PHE

GLY

TYR

GLU

LYS

VAL

12

ASP

GLN

ILE

MET

LYS

ALA

ASP

ALA

ASN

GLY

13

ASP

GLY

TYR

ILE

THR

LEU

GLU

PHE

LEU

14

ALA

PHE

ASN

LEU

Entity 2, CALCIUM (II) ION - Ca - 40.078 Da.

1

CA

Samples:

sample_1: Entamoeba histolytica calcium binding protein, [U-13C; U-15N], 1.5 mM

cond_1: pH: 4.2; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions
N15 HSQC	sample_1	not available	cond_1
CBCANH	sample_1	not available	cond_1
CBCA(CO)NH	sample_1	not available	cond_1
HNCA	sample_1	not available	cond_1
HN(CA)CO	sample_1	not available	cond_1
HNCO	sample_1	not available	cond_1

Software:

Felix - Data processing

NMR spectrometers:

Varian . 600 MHz

PDB	2JNX
DBJ	BAA22013
GB	AAR97975 EAL51694 EDR27146 EKE36904 EMD43571
REF	XP_001736602 XP_008860769 XP_657080