BMRB Entry 6383

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PDB ID: 1xyw
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6383
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR solution structure of the recombinant elk and mouse/elk variant prion proteins

Deposition date:

2004-11-10

Original release date:

2005-01-14

Authors:

Gossert, Alvar; Bonjour, Sophie; Lysek, Dominikus

Citation:

Citation: Gossert, Alvar; Bonjour, Sophie; Lysek, Dominikus; Fiorito, Francesco; Wuthrich, Kurt. "Prion protein NMR structures of the elk and of mouse/elk hybrids" Proc. Natl. Acad. Sci. U.S.A. 102, 646-650 (2005).

Assembly members:

Assembly members:
elk prion protein, polymer, 113 residues, Formula weight is not available

Natural source:

Natural source: Common Name: American elk Taxonomy ID: 9864 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: cervus Cervus elaphus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Eschericia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
elk prion protein: GSVVGGLGGYMLGSAMSRPL IHFGNDYEDRYYRENMYRYP NQVYYRPVDQYNNQNTFVHD CVNITVKQHTVTTTTKGENF TETDIKMMERVVEQMCITQY QRESEAYYQRGAS

Data sets:

assigned_chemical_shifts
- chem_shift_list_1

Data type	Count
13C chemical shifts	325
15N chemical shifts	132
1H chemical shifts	800

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	eprp monomer	1

Entities:

Entity 1, eprp monomer 113 residues - Formula weight is not available

1

GLY

SER

VAL

GLY

LEU

GLY

TYR

2

MET

LEU

GLY

SER

ALA

MET

SER

ARG

PRO

LEU

3

ILE

HIS

PHE

GLY

ASN

ASP

TYR

GLU

ASP

ARG

4

TYR

ARG

GLU

ASN

MET

TYR

ARG

TYR

PRO

5

ASN

GLN

VAL

TYR

ARG

PRO

VAL

ASP

GLN

6

TYR

ASN

GLN

ASN

THR

PHE

VAL

HIS

ASP

7

CYS

VAL

ASN

ILE

THR

VAL

LYS

GLN

HIS

THR

8

VAL

THR

LYS

GLY

GLU

ASN

PHE

9

THR

GLU

THR

ASP

ILE

LYS

MET

GLU

ARG

10

VAL

GLU

GLN

MET

CYS

ILE

THR

GLN

TYR

11

GLN

ARG

GLU

SER

GLU

ALA

TYR

GLN

ARG

12

GLY

ALA

SER

Samples:

sample_1: elk prion protein, [U-13C; U-15N], 1 mM

conditions_1: pH: 4.5; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
15N-edited NOESY	sample_1	not available	conditions_1
13C-edited NOESY	sample_1	not available	conditions_1
HNCA	sample_1	not available	conditions_1

Software:

No software information available

NMR spectrometers:

Bruker DRX 750 MHz

PDB	1XYW
EMBL	CAA70902
GB	AAA68941 AAB61573 AAB94788 AAC12860 AAC12861
SP	P47852 P67986 P67987 Q5UJG3