BMRB Entry 6355

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PDB ID: 1xhj
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6355
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure Of The Staphylococcus Epidermis Protein SE0936. Northest Strucutral Genomics Consortium Target SeR8.

Deposition date:

2004-10-14

Original release date:

2006-04-06

Authors:

Baran, M.; Huang, Y.; Acton, T.; Xiao, R.; Montelione, G.

Citation:

Citation: Baran, M.; Huang, Y.; Acton, T.; Xiao, R.; Montelione, G.. "Solution Structure Of The Staphylococcus Epidermis Protein SE0936. Northest Strucutral Genomics Consortium Target SeR8. " .

Assembly members:

Assembly members:
SE0936, polymer, 88 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Staphylococcus epidermidis Taxonomy ID: 1282 Superkingdom: Bacteria Kingdom: not available Genus/species: Staphylococcus epidermidis

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SE0936: MPTENPTMFDQVAEVIERLR PFLLRDGGDCTLVDVEDGIV KLQLHGACGTCPSSTITLKA GIERALHEEVPGVIEVEQVF LEHHHHHH

Data sets:

assigned_chemical_shifts
- chemical_shift_set_1

Data type	Count
1H chemical shifts	573
13C chemical shifts	348
15N chemical shifts	82

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SE0936	1

Entities:

Entity 1, SE0936 88 residues - Formula weight is not available

1

MET

PRO

THR

GLU

ASN

PRO

THR

MET

PHE

ASP

2

GLN

VAL

ALA

GLU

VAL

ILE

GLU

ARG

LEU

ARG

3

PRO

PHE

LEU

ARG

ASP

GLY

ASP

CYS

4

THR

LEU

VAL

ASP

VAL

GLU

ASP

GLY

ILE

VAL

5

LYS

LEU

GLN

LEU

HIS

GLY

ALA

CYS

GLY

THR

6

CYS

PRO

SER

THR

ILE

THR

LEU

LYS

ALA

7

GLY

ILE

GLU

ARG

ALA

LEU

HIS

GLU

VAL

8

PRO

GLY

VAL

ILE

GLU

VAL

GLU

GLN

VAL

PHE

9

LEU

GLU

HIS

Samples:

sample_1: SE0936, [U-5% 13C; U-100% 15N], 8 mM; NaN3 0.02%; DTT 10 mM; CaCl2 5 mM; NaCl 100 mM; MES 20 mM; D2O 5%; H20 95%

sample_2: SE0936, [U-100% 13C; U-100% 15N], 8 mM; NaN3 0.02%; DTT 10 mM; CaCl2 5 mM; NaCl 100 mM; MES 20 mM; D2O 5%; H20 95%

sample_cond_1: pH: 6.5; temperature: 293 K; ionic strength: 100 mM; pressure: 1 atm

Experiments:

Name	Sample	Sample state	Sample conditions
C13-HSQC	not available	not available	not available
NH-HSQC	not available	not available	not available
HNCO	not available	not available	not available
HNCAB	not available	not available	not available
N15-NOESY	not available	not available	not available
C13-NOESY	not available	not available	not available

Software:

X-PLOR v2.9.7 - structure solution, refinement

NMRPipe v2.1 - processing

AutoAssign v1.14 - data analysis

AutoStructure v2.0 - data analysis

SPINS v5.0 - data analysis

HYPER v3.2 - data analysis

sparky v3.106 - data analysis

VNMR v6.1 - collection

xwin-nmr - collection

NMR spectrometers:

Bruker AVANCE 800 MHz

PDB	1XHJ
DBJ	BAE05324
EMBL	CCB54437 CDI72254 CDM13169
GB	AAO04227 AAW37908 AAW53911 ADC88025 AGC91125
REF	NP_764185 WP_001831958 WP_002433501 WP_002456117 WP_010956550