BMRB Entry 6341

Click here to enlarge.

PDB ID: 1xoy
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6341
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein

Deposition date:

2004-10-06

Original release date:

2004-11-01

Authors:

Song, Jikui; Tyler, Robert; Lee, Min; Markley, John

Citation:

Citation: Song, Jikui; Tyler, Robert; Lee, Min; Markley, John. "Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein" .

Assembly members:

Assembly members:
At3g04780.1, polymer, 161 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Thale cress Taxonomy ID: 3702 Superkingdom: Eukaryota Kingdom: Plantae Genus/species: Arabidopsis thaliana

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
At3g04780.1: SSAESASQIPKGQVDLLDFI DWSGVECLNQSSSHSLPNAL KQGYREDEGLNLESDADEQL LIYIPFNQVIKLHSFAIKGP EEEGPKTVKFFSNKEHMCFS NVNDFPPSDTAELTEENLKG KPVVLKYVKFQNVRSLTIFI EANQSGSEVTKVQKIALYGS T

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts

Data type	Count
1H chemical shifts	987
13C chemical shifts	627
15N chemical shifts	171

Time Domain Data

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	At3g04780.1	1

Entities:

Entity 1, At3g04780.1 161 residues - Formula weight is not available

1

SER

ALA

GLU

SER

ALA

SER

GLN

ILE

PRO

2

LYS

GLY

GLN

VAL

ASP

LEU

ASP

PHE

ILE

3

ASP

TRP

SER

GLY

VAL

GLU

CYS

LEU

ASN

GLN

4

SER

HIS

SER

LEU

PRO

ASN

ALA

LEU

5

LYS

GLN

GLY

TYR

ARG

GLU

ASP

GLU

GLY

LEU

6

ASN

LEU

GLU

SER

ASP

ALA

ASP

GLU

GLN

LEU

7

LEU

ILE

TYR

ILE

PRO

PHE

ASN

GLN

VAL

ILE

8

LYS

LEU

HIS

SER

PHE

ALA

ILE

LYS

GLY

PRO

9

GLU

GLY

PRO

LYS

THR

VAL

LYS

PHE

10

PHE

SER

ASN

LYS

GLU

HIS

MET

CYS

PHE

SER

11

ASN

VAL

ASN

ASP

PHE

PRO

SER

ASP

THR

12

ALA

GLU

LEU

THR

GLU

ASN

LEU

LYS

GLY

13

LYS

PRO

VAL

LEU

LYS

TYR

VAL

LYS

PHE

14

GLN

ASN

VAL

ARG

SER

LEU

THR

ILE

PHE

ILE

15

GLU

ALA

ASN

GLN

SER

GLY

SER

GLU

VAL

THR

16

LYS

VAL

GLN

LYS

ILE

ALA

LEU

TYR

GLY

SER

17

THR

Samples:

sample: At3g04780.1, [U-15N; U-13C], 1 mM; DTT 10 mM; KH2PO4 50 mM

sample_conditions: pH: 7.2; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
HNCACB	not available	not available	not available
CBCACONH	not available	not available	not available
3D C13-NOESY	not available	not available	not available
3D N15-NOESY	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
HCCONH	not available	not available	not available
HNCO	not available	not available	not available
CCONH	not available	not available	not available
1H 15N-HSQC	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Varian Inova 600 MHz

PDB	1XOY
GB	AAF04904 AAG51403 AAL25533 AAM10337 AAM65766
REF	NP_566238 XP_002884470 XP_006298669 XP_006408149 XP_010418822
SP	Q9SQZ9
AlphaFold	Q9SQZ9