BMRB Entry 6286

Name: 1H and 15N assignment of SMRT DAD
Published: 2005-06-02

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PDB ID: 1xc5
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR6286
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H and 15N assignment of SMRT DAD

Deposition date:

2004-08-10

Original release date:

2005-06-02

Authors:

Codina, Anna; Schwabe, John

Citation:

Citation: Codina, Anna; Love, James; Li, Y.; Lazar, M.; Neuhaus, David; Schwabe, John. "From The Cover: Structural insights into the interaction and activation of histone deacetylase 3 by nuclear receptor corepressors." Proc. Natl. Acad. Sci. U. S. A. 102, 6009-6014 (2005).
PubMed: 15837933

Assembly members:

Assembly members:
SMRT deacetylase activation domain, polymer, 68 residues, 8291.9 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SMRT deacetylase activation domain: NGLMADPMKVYKDRQVMNMW SEQEKETFREKFMQHPKNFG LIASFLERKTVAECVLYYYL TKKNENYK

Data sets:

assigned_chemical_shifts
- shift_1

Data type	Count
15N chemical shifts	73
1H chemical shifts	403

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SMRT DAD	1

Entities:

Entity 1, SMRT DAD 68 residues - 8291.9 Da.

1

ASN

GLY

LEU

MET

ALA

ASP

PRO

MET

LYS

VAL

2

TYR

LYS

ASP

ARG

GLN

VAL

MET

ASN

MET

TRP

3

SER

GLU

GLN

GLU

LYS

GLU

THR

PHE

ARG

GLU

4

LYS

PHE

MET

GLN

HIS

PRO

LYS

ASN

PHE

GLY

5

LEU

ILE

ALA

SER

PHE

LEU

GLU

ARG

LYS

THR

6

VAL

ALA

GLU

CYS

VAL

LEU

TYR

LEU

7

THR

LYS

ASN

GLU

ASN

TYR

LYS

Samples:

sample_1: SMRT deacetylase activation domain1 – 2 mM; NaCl 50 mM; sodium phosphate 50 mM

sample_2: SMRT deacetylase activation domain, [U-15N], 1 – 2 mM; NaCl 50 mM; sodium phosphate 50 mM

cond_1: ionic strength: 0.350 M; pH: 6.8; temperature: 290 K

Experiments:

Name	Sample	Sample state	Sample conditions
(1H, 1H) DQF-COSY	not available	not available	cond_1
(1H, 1H) DQ-correlation	not available	not available	cond_1
(1H, 1H) NOESY	not available	not available	cond_1
(1H, 1H) TOCSY	not available	not available	cond_1
2D 15N-HSQC	not available	not available	cond_1
3D 15N-NOESY-HSQC	not available	not available	cond_1
3D 15N-TOCSY-HSQC	not available	not available	cond_1

Software:

No software information available

NMR spectrometers:

Bruker Avance 800 MHz
Bruker DMX 600 MHz
Bruker DRX 500 MHz

PDB	1XC5 4A69
GB	AAB91446
REF	XP_001102940 XP_004310483 XP_006751297 XP_006938465 XP_009180278
TPG	DAA20733